RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 E7ENX8 843 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TNFRSF11BO00300 401 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 CYP7B1O75881 506 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 OR6B1O95007 311 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 HTR1EP28566 365 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 GUCA1AP43080 201 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 AQP4P55087 323 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TAS2R41P59536 307 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 USF2Q15853 346 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 LCTLQ6UWM7 567 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 HSD11B1LQ7Z5J1 315 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 GRPEL2Q8TAA5 225 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 SLC22A12Q96S37 553 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TRPV5Q9NQA5 729 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 THAP10Q9P2Z0 257 aaPredicted RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 P2RX2Q9UBL9 471 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 RSL24D1Q9UHA3 163 aaKnown RBP11.75□□□□□ -0.53
SMAD9-201ENST00000350148 DNAJC15Q9Y5T4 150 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TOR1BO14657 336 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 COQ9O75208 318 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 AOAHP28039 575 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 DSTNP60981 165 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 AKIRIN2Q53H80 203 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TOR1AIP1Q5JTV8 583 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 SLC36A4Q6YBV0 504 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 THAP5Q7Z6K1 395 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TREML1Q86YW5 311 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM145Q8NBT3 493 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TEX47Q8TBZ9 253 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 SORT1Q99523 831 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 BOCQ9BWV1 1114 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM27Q9HBJ8 222 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TMEM184CQ9NVA4 438 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 KLHL3Q9UH77 587 aa11.75□□□□□ -0.53
SMAD9-201ENST00000350148 TRBV23OR9-2A0A075B6M9 112 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 OR10H3O60404 316 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 C1SP09871 688 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 PIM1P11309 404 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 NOS3P29474 1203 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 PLA2G16P53816 162 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 TBPL1P62380 186 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 PDZD3Q86UT5 571 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ZDHHC21Q8IVQ6 265 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 OR5P2Q8WZ92 322 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 RIT1Q92963 219 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 DGCR14Q96DF8 476 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 RBM18Q96H35 190 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 BRINP2Q9C0B6 783 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 BHLHE41Q9C0J9 482 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ADAM30Q9UKF2 790 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 CFL2Q9Y281 166 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 LRRC42Q9Y546 428 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 NDUFS4O43181 175 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ERI3O43414 337 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 KLK1P06870 262 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 BMP7P18075 431 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 IGFBP5P24593 272 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 MTPNP58546 118 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 RPS15AP62244 130 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 TAB1Q15750 504 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 TCEAL5Q5H9L2 206 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 OR4F3Q6IEY1 312 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 CDC73Q6P1J9 531 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 IQCF2Q8IXL9 164 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 OR2L2Q8NH16 312 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ADAMTS18Q8TE60 1221 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 HDAC2Q92769 488 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SLC38A4Q969I6 547 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 NSUN5Q96P11 429 aaKnown RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SLC35A5Q9BS91 424 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SMOXQ9NWM0 555 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 A6NHS1 94 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 FADS2P1A8MWK0 482 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 MYL12BO14950 172 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 MAGEB3O15480 346 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 PDYNP01213 254 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 HIST1H2ABP04908 130 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ANXA8P13928 327 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 DRD2P14416 443 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ENGP17813 658 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 IGFBP6P24592 240 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 RAB28P51157 221 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SH3BP2P78314 561 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SCARB2Q14108 478 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 HIST3H2AQ7L7L0 130 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 FAM129CQ86XR2 697 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 FAM46DQ8NEK8 389 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 HIST1H2ACQ93077 130 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 AP1M2Q9Y6Q5 423 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SEMA4FO95754 770 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SERPINA1P01009 418 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 TCF3P15923 654 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 XRCC1P18887 633 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 CCR10P46092 362 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SGSHP51688 502 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 SLC16A1P53985 500 aa11.74□□□□□ -0.53
SMAD9-201ENST00000350148 ZNF155Q12901 538 aaPredicted RBP11.74□□□□□ -0.53
SMAD9-201ENST00000350148 FADDQ13158 208 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms