RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 FAF1Q9UNN5 650 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ERVW-1Q9UQF0 538 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TESMINQ9Y4I5 508 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 A0A1W2PS29 197 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 FUOMA2VDF0 154 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 FFAR1O14842 300 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PRAMEF10O60809 474 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 NDUFS2O75306 463 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CLPXO76031 633 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CXCL14O95715 111 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 OR56A5P0C7T3 313 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 CCL5P13501 91 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 HOXB3P14651 431 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RRM2P31350 389 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RYKP34925 604 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM115Q12893 351 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 DNASE1L3Q13609 305 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TP53BP2Q13625 1128 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MAD2L1BPQ15013 274 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 INAVAQ3KP66 663 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RPS26P11Q5JNZ5 115 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 PERM1Q5SV97 790 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MPP7Q5T2T1 576 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM220Q6QAJ8 160 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LIPIQ6XZB0 460 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLCO4C1Q6ZQN7 724 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 USP45Q70EL2 814 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LRRC70Q7Z2Q7 622 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 RBM45Q8IUH3 476 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ADGRF3Q8IZF5 1079 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 EID3Q8N140 333 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TMEM132CQ8N3T6 1108 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 MFSD4AQ8N468 514 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TTC29Q8NA56 475 aaPredicted RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 KREMEN2Q8NCW0 462 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 IRF7Q92985 503 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 DTNBP1Q96EV8 351 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 TUBA1CQ9BQE3 449 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 LGR4Q9BXB1 951 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ACOT13Q9NPJ3 140 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 AKIP1Q9NQ31 210 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 THUMPD1Q9NXG2 353 aaKnown RBP5.81□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF226Q9NYT6 803 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SLC23A2Q9UGH3 650 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 SNX6Q9UNH7 406 aa5.81□□□□□ -1.48
CLCN3-201ENST00000347613 C2orf16Q68DN1 1984 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 PRAMEF27A3QJZ7 478 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 M0QX08 132 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 SCAMP2O15127 329 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 NARSO43776 548 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 CCNDBP1O95273 360 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 POP4O95707 220 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 C6orf47O95873 294 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 DNTTP04053 509 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 MYOGP15173 224 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 EPCAMP16422 314 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 C21orf59P57076 290 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 TSTA3Q13630 321 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 NR1D2Q14995 579 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 CLCA4Q14CN2 919 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 MOGQ16653 247 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 DUSP7Q16829 419 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 SMU1Q2TAY7 513 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 LEXMQ3ZCV2 418 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 FAHD1Q6P587 224 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 BRAT1Q6PJG6 821 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 AHSA2Q719I0 299 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ANKRD13BQ86YJ7 626 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ADHFE1Q8IWW8 467 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 SLC5A8Q8N695 610 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 LSM14AQ8ND56 463 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 SLAIN1Q8ND83 568 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 OR8J2Q8NGG1 315 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 OR4D11Q8NGI4 311 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 MRPS31Q92665 395 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 OTUB1Q96FW1 271 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF641Q96N77 438 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ALPK1Q96QP1 1244 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 NELL2Q99435 816 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 FEVQ99581 238 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 MACROD1Q9BQ69 325 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 AICDAQ9GZX7 198 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 MAGIXQ9H6Y5 334 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ATG2AQ2TAZ0 1938 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF99A8MXY4 864 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 AGRPO00253 132 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 PRKRAO75569 313 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 C1orf105O95561 183 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 FABP3P05413 133 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ANXA4P09525 319 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 CISD3P0C7P0 127 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 CBSLP0DN79 551 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ITGAMP11215 1152 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 ITIH1P19827 911 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 PSMB5P28074 263 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 CBSP35520 551 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 VIPR2P41587 438 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 PPP3CCP48454 512 aa5.8□□□□□ -1.48
CLCN3-201ENST00000347613 EEF1A2Q05639 463 aaKnown RBP5.8□□□□□ -1.48
CLCN3-201ENST00000347613 NFE2L1Q14494 772 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms