RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 OR4A15Q8NGL6 344 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 BADQ92934 168 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 THAP11Q96EK4 314 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 HSPBAP1Q96EW2 488 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 WDR34Q96EX3 536 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 FAM129BQ96TA1 746 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 RHNO1Q9BSD3 238 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 RAPGEFL1Q9UHV5 662 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 SAMHD1Q9Y3Z3 626 aaKnown RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 GMEB1Q9Y692 573 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 PIPSLA2A3N6 862 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 C1GALT1C1LP0DN25 315 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 CCNA2P20248 432 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 GP2P55259 537 aaKnown RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 IL18R1Q13478 541 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 FNDC3BQ53EP0 1204 aaKnown RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 TMEM240Q5SV17 173 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 KLHL35Q6PF15 583 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 CRTC3Q6UUV7 619 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 TRMT11Q7Z4G4 463 aaKnown RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 CCDC71Q8IV32 467 aaPredicted RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 LAS2Q8IYD9 372 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 C2orf73Q8N5S3 287 aaPredicted RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 OR9A1PQ8NGU1 263 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 WFIKKN2Q8TEU8 576 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 STARD8Q92502 1023 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 UBE2FQ969M7 185 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 MUL1Q969V5 352 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 CIDECQ96AQ7 238 aaPredicted RBP14.84□□□□□ -0.03
UPF3B-202ENST00000345865 IL17FQ96PD4 163 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 NODALQ96S42 347 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 DMRT3Q9NQL9 472 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 TMEM184CQ9NVA4 438 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 BLOC1S6Q9UL45 172 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 DNAH14Q0VDD8 3507 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 PLXND1Q9Y4D7 1925 aa14.84□□□□□ -0.03
UPF3B-202ENST00000345865 MUC22E2RYF6 1773 aaPredicted RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 RNASET2O00584 256 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 POP7O75817 140 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ANGPTL1O95841 491 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 INHBBP09529 407 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ADRB3P13945 408 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 NR4A1P22736 598 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 HTR1BP28222 390 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ACADLP28330 430 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 CD6P30203 668 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 HPCAL1P37235 193 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 MAPK9P45984 424 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ITGA1P56199 1179 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF763Q0D2J5 394 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 SMN1Q16637 294 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 HNRNPA1L2Q32P51 320 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ANXA8L1Q5VT79 327 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 SLC16A12Q6ZSM3 486 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 PIWIL3Q7Z3Z3 882 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 C11orf96Q7Z7L8 435 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 HORMAD1Q86X24 394 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 VPS37AQ8NEZ2 397 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF566Q969W8 418 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 FUNDC2Q9BWH2 189 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 TMEM121BQ9BXQ6 578 aaPredicted RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 REEP4Q9H6H4 257 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 THUMPD1Q9NXG2 353 aaKnown RBP14.83□□□□□ -0.03
UPF3B-202ENST00000345865 ATP6V1HQ9UI12 483 aa14.83□□□□□ -0.03
UPF3B-202ENST00000345865 SZT2Q5T011 3432 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 NUP210Q8TEM1 1887 aaPredicted RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 LINC01553A4QN01 128 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 M0QX08 132 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 FOXE1O00358 373 aaPredicted RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 MAN1A2O60476 641 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 UGT2B11O75310 529 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 CCDC159P0C7I6 412 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 ETFAP13804 333 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 MYOGP15173 224 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 TNFRSF1BP20333 461 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 MLLT10P55197 1068 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 EMX1Q04741 257 aaPredicted RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 TOP3AQ13472 1001 aaPredicted RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 AQP6Q13520 282 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 PLA2G15Q8NCC3 412 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 ZDHHC5Q9C0B5 715 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 TRIM39Q9HCM9 518 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 NDRG4Q9ULP0 352 aaKnown RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 PLAGL1Q9UM63 463 aa14.83□□□□□ -0.04
UPF3B-202ENST00000345865 FAF1Q9UNN5 650 aaPredicted RBP14.83□□□□□ -0.04
UPF3B-202ENST00000345865 ZNF197O14709 1029 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 JRKO75564 520 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 C6orf47O95873 294 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ADH1CP00326 375 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 OPN1SWP03999 348 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 FURINP09958 794 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 ARHGDIAP52565 204 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 VN1R5Q7Z5H4 357 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 FAM124AQ86V42 546 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 MMP21Q8N119 569 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 TTC29Q8NA56 475 aaPredicted RBP14.82□□□□□ -0.04
UPF3B-202ENST00000345865 TMIEQ8NEW7 156 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 RAB2BQ8WUD1 216 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 FAR1Q8WVX9 515 aa14.82□□□□□ -0.04
UPF3B-202ENST00000345865 NRBF2Q96F24 287 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms