RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ENAMQ9NRM1 1142 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 GPR142Q7Z601 462 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NAXEQ8NCW5 288 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 OR5T1Q8NG75 326 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 FANK1Q8TC84 345 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF675Q8TD23 568 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 C3orf49Q96BT1 292 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 DPYSL5Q9BPU6 564 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 TCEAL2Q9H3H9 227 aaPredicted RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 IRF6O14896 467 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NUDT17P0C025 328 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 CHRNB1P11230 501 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NPTX1Q15818 432 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ZFP82Q8N141 532 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 GBA3Q9H227 469 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 PROM1O43490 865 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 NOBOXO60393 691 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 HTR2BP41595 481 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 MPP1Q00013 466 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ATXN7L3Q14CW9 347 aaPredicted RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 MPP7Q5T2T1 576 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 FAM46DQ8NEK8 389 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 AURKBQ96GD4 344 aaPredicted RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF609O15014 1411 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 SMAD9O15198 467 aaKnown RBP17.14■□□□□ 0.33
SMAD4-201ENST00000342988 FADS1O60427 444 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 SC5DO75845 299 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 PRMT2P55345 433 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 HSD17B7P56937 341 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 ST3GAL3Q11203 375 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM234Q8WY98 164 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 BMP6P22004 513 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 CERS1P27544 350 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 GBE1Q04446 702 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 VSTM1Q6UX27 236 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 STON2Q8WXE9 905 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.14■□□□□ 0.335e-7■■□□□ 12.5
SMAD4-201ENST00000342988 FOLH1BQ9HBA9 442 aa17.14■□□□□ 0.33
SMAD4-201ENST00000342988 MDC1Q14676 2089 aaKnown RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 hCG_1807616A0A1W2PRN6 198 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 MTMR11A4FU01 709 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 UBFD1O14562 309 aaKnown RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 P2RX1P51575 399 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 IRF5Q13568 498 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 ZFPM1Q8IX07 1006 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 OR10G2Q8NGC3 310 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 HAS2Q92819 552 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 FBXO7Q9Y3I1 522 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 SEC14L2O76054 403 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 GOT1P17174 413 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 SLC25A52Q3SY17 297 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 UGT2A3Q6UWM9 527 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 UPRTQ96BW1 309 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 TFB2MQ9H5Q4 396 aaKnown RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 POLMQ9NP87 494 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 XPNPEP1Q9NQW7 623 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 PRMT8Q9NR22 394 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 B3GNT2Q9NY97 397 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 TMEM2Q9UHN6 1383 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 LOC100130705A0A1B0GUX0 176 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CD9P21926 228 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 MSX2P35548 267 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF33AQ06730 810 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 HACD2Q6Y1H2 254 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 KIAA0907Q7Z7F0 614 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 FAM110BQ8TC76 370 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 SEC14L6B5MCN3 397 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 DNM1LO00429 736 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CBSLP0DN79 551 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CBSP35520 551 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CAMKVQ8NCB2 501 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 FEM1CQ96JP0 617 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 KCNIP2Q9NS61 270 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 EFCAB7A8K855 629 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 TOR1AO14656 332 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 UCHL1P09936 223 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 GPR68Q15743 365 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CLNKQ7Z7G1 428 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 GTPBP8Q8N3Z3 284 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 OR6N1Q8NGY5 312 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 HS6ST2Q96MM7 605 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CYP2S1Q96SQ9 504 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 WDR77Q9BQA1 342 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 A0A1W2PPL8 197 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 A8MVM7 634 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 APOA2P02652 100 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 BDKRB2P30411 391 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 ZNF574Q6ZN55 896 aaPredicted RBP17.13■□□□□ 0.33
SMAD4-201ENST00000342988 LIX1LQ8IVB5 337 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 KCT2Q8NC54 265 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 CPT1BQ92523 772 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 MROQ9BYG7 248 aa17.13■□□□□ 0.33
SMAD4-201ENST00000342988 RAB3BP20337 219 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms