RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 ZNF282Q9UDV7 671 aaPredicted RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 ZFP69BQ9UJL9 534 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 G3BP2Q9UN86 482 aaKnown RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 ZNF451Q9Y4E5 1061 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 HS3ST3B1Q9Y662 390 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 POC1B-GALNT4F8VUJ3 575 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 H0YIG0 161 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 UBXN8O00124 270 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 SOCS6O14544 535 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 ZNF500O60304 480 aaPredicted RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 STK16O75716 305 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 KLHL2O95198 593 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 NSA2O95478 260 aaKnown RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 PDGFAP04085 211 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 C1GALT1C1LP0DN25 315 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 GNAZP19086 355 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 AHRP35869 848 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 MSH2P43246 934 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 SERPINB9P50453 376 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 CCL11P51671 97 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 EFNA3P52797 238 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 MAT1AQ00266 395 aaKnown RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 KLC1Q07866 573 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 HYAL2Q12891 473 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 PWP1Q13610 501 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 NDUFA9Q16795 377 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 SYT16Q17RD7 645 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 TEX35Q5T0J7 233 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 LAPTM4BQ86VI4 370 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 ZC3H7AQ8IWR0 971 aaKnown RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 AFAP1L2Q8N4X5 818 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 TMEM102Q8N9M5 508 aaPredicted RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 ZCCHC10Q8TBK6 192 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 NT5CQ8TCD5 201 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 UBTD2Q8WUN7 234 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 NACC2Q96BF6 587 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 IP6K3Q96PC2 410 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 AIF1LQ9BQI0 150 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 CD244Q9BZW8 370 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 TGIF2Q9GZN2 237 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 GPRC5BQ9NZH0 403 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 COPG2Q9UBF2 871 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 TRPC4Q9UBN4 977 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 MAP4K5Q9Y4K4 846 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 SLC22A7Q9Y694 548 aa14.59□□□□□ -0.07
VAPA-201ENST00000340541 TNRC6AQ8NDV7 1962 aaKnown RBP14.59□□□□□ -0.07
VAPA-201ENST00000340541 CCDC189A1A4V9 331 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 MASP2O00187 686 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 PRPF4O43172 522 aaKnown RBP eCLIP14.58□□□□□ -0.08
VAPA-201ENST00000340541 NDUFS4O43181 175 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 KLK8O60259 260 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 SLC35G6P0C7Q6 338 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 IL1RNP18510 177 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 TNFRSF8P28908 595 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 AVPR1BP47901 424 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 GLRBP48167 497 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 OCA2Q04671 838 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 ACAP2Q15057 778 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 FAM83EQ2M2I3 478 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 DCAF10Q5QP82 559 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 ATG9BQ674R7 924 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 KIRREL2Q6UWL6 708 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 PRSS58Q8IYP2 241 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 CPT1CQ8TCG5 803 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 CREB3L4Q8TEY5 395 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 MIEF2Q96C03 454 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 WDR34Q96EX3 536 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 AICDAQ9GZX7 198 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 VPS11Q9H270 941 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 MKKSQ9NPJ1 570 aaPredicted RBP14.58□□□□□ -0.08
VAPA-201ENST00000340541 SEMA3GQ9NS98 782 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 ZNF358Q9NW07 568 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 IKBKGQ9Y6K9 419 aa14.58□□□□□ -0.08
VAPA-201ENST00000340541 USP9XQ93008 2570 aaPredicted RBP14.58□□□□□ -0.08
VAPA-201ENST00000340541 EXOC1LA0A1B0GW35 172 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 SUPT3HB4E1H0 165 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 TRIM49D1C9J1S8 452 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 SGK494L7N484 410 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 AGPSO00116 658 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 MAP2K7O14733 419 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 DPM1O60762 260 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 SUPT3HO75486 399 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 KRT38O76015 456 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 S100BP04271 92 aaPredicted RBP14.57□□□□□ -0.08
VAPA-201ENST00000340541 CD22P20273 847 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 CNTFP26441 200 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 AGTR2P50052 363 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 RRADP55042 308 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 E2F2Q14209 437 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 SLBPQ14493 270 aaKnown RBP eCLIP14.57□□□□□ -0.08
VAPA-201ENST00000340541 SLC29A2Q14542 456 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 PDK4Q16654 411 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 TECRLQ5HYJ1 363 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 FHL5Q5TD97 284 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 ADGRD1Q6QNK2 874 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 LRRC70Q7Z2Q7 622 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 TBC1D19Q8N5T2 526 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 CRB3Q9BUF7 120 aa14.57□□□□□ -0.08
VAPA-201ENST00000340541 CAPS2Q9BXY5 557 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms