RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 LGALS3BPQ08380 585 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 DMC1Q14565 340 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 OR2B11Q5JQS5 317 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 RGS7BPQ6MZT1 257 aaPredicted RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 KRT74Q7RTS7 529 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR155Q7Z3F1 870 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 PLEKHH3Q7Z736 793 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 PSTKQ8IV42 348 aaKnown RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 RBFAQ8N0V3 343 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 Q8N402 240 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 BVESQ8NE79 360 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 TTC16Q8NEE8 873 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 OR10A6Q8NH74 314 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 TRMT10AQ8TBZ6 339 aaKnown RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 GGHQ92820 318 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 POM121Q96HA1 1249 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 MEGF10Q96KG7 1140 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 EXOC2Q96KP1 924 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 ZDHHC15Q96MV8 337 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 CGRRF1Q99675 332 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 NKX6-2Q9C056 277 aaPredicted RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 AP5M1Q9H0R1 490 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 CCNB1IP1Q9NPC3 277 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC52A3Q9NQ40 469 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 RPS6KA6Q9UK32 745 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 NDRG4Q9ULP0 352 aaKnown RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 EXO1Q9UQ84 846 aaKnown RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 COL1A2P08123 1366 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 KCNK1O00180 336 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 OR1I1O60431 355 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 AP2A2O94973 939 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 GADD45GO95257 159 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CYP2F1P24903 491 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 DDX6P26196 483 aaKnown RBP eCLIP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 HTR1EP28566 365 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 PTGFRP43088 359 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 BAG6P46379 1132 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 IDH2P48735 452 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 ATP12AP54707 1039 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CSNK2BP67870 215 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TNFRSF17Q02223 184 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CHAF1BQ13112 559 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 DEFB115Q30KQ5 88 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 RANBP10Q6VN20 620 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 USP53Q70EK8 1073 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 MRPL10Q7Z7H8 261 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 XYLT1Q86Y38 959 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 STX19Q8N4C7 294 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TMEM203Q969S6 136 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 MRPS24Q96EL2 167 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SFXN2Q96NB2 322 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 HBEGFQ99075 208 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CRISPLD1Q9H336 500 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 IKZF5Q9H5V7 419 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 COMMD3Q9UBI1 195 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 GLS2Q9UI32 602 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 MAGEL2Q9UJ55 1249 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 MRTO4Q9UKD2 239 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SMCHD1A6NHR9 2005 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 A0A1B0GWJ7 208 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 GPR31O00270 319 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 VEGFDO43915 354 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TRIM3O75382 744 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CLN5O75503 358 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CDRT1O95170 752 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CST3P01034 146 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM157BP0CG42 384 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 ITGAMP11215 1152 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SREBF1P36956 1147 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CXCR3P49682 368 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TAS2R39P59534 338 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TBCEQ15813 527 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 MPPE1Q53F39 396 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 RAB11FIP2Q7L804 512 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SLC26A9Q7LBE3 791 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 KRT77Q7Z794 578 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 CDKL3Q8IVW4 592 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 PHACTR4Q8IZ21 702 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 GPD1LQ8N335 351 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SVOPLQ8N434 492 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 EFHBQ8N7U6 833 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 L3MBTL4Q8NA19 623 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 IL17RCQ8NAC3 791 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TWIST2Q8WVJ9 160 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 FATE1Q969F0 183 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 RAB7BQ96AH8 199 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 NXPE2Q96DL1 559 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 ZBTB45Q96K62 511 aaPredicted RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 ADPGKQ9BRR6 497 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SNRNP25Q9BV90 132 aaKnown RBP9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 LRRC3Q9BY71 257 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 TUBB1Q9H4B7 451 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 SEC14L4Q9UDX3 406 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 POLG2Q9UHN1 485 aa9.33□□□□□ -0.92
PTCHD4-201ENST00000339488 FAM234BA2RU67 622 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 K7ERI5 159 aa9.32□□□□□ -0.92
PTCHD4-201ENST00000339488 HCN1O60741 890 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms