RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 IKZF5Q9H5V7 419 aa12.05□□□□□ -0.48
RIOK3-201ENST00000339486 SEC14L4Q9UDX3 406 aa12.05□□□□□ -0.48
RIOK3-201ENST00000339486 HHLA1C9JL84 531 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 LAMP1P11279 417 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 TACR1P25103 407 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 RGS6P49758 472 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 HK3P52790 923 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 YBX1P67809 324 aaKnown RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 SPHARQ15513 63 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ADGRF1Q5T601 910 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GDF6Q6KF10 455 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 MED27Q6P2C8 311 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZNF280BQ86YH2 543 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 OR9Q2Q8NGE9 314 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZNF671Q8TAW3 534 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CEP295NLQ96MC4 621 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CCDC115Q96NT0 180 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GJD2Q9UKL4 321 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 RIMKLBQ9ULI2 386 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 DNMT3AQ9Y6K1 912 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZNFX1Q9P2E3 1918 aaKnown RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 PCSK2P16519 638 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 C4BPBP20851 252 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CSKP41240 450 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 HEPACAMQ14CZ8 416 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 C1QTNF12Q5T7M4 302 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 PRSS55Q6UWB4 352 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 SUSD1Q6UWL2 747 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 TMEM179BQ7Z7N9 219 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 RAB42Q8N4Z0 105 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 HTATIP2Q9BUP3 242 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZNF717Q9BY31 904 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CAPN10Q9HC96 672 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CCDC59Q9P031 241 aaKnown RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 A0A1W2PRB8 838 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 H3BM21 787 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 KPNA3O00505 521 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CACNG3O60359 315 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GPAT3Q53EU6 434 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GTF2IRD2BQ6EKJ0 949 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CAPN13Q6MZZ7 669 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GTF2IRD2Q86UP8 949 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 PHYKPLQ8IUZ5 450 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZNF614Q8N883 585 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 FAM46DQ8NEK8 389 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 DYNC2LI1Q8TCX1 351 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 GANCQ8TET4 914 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 TP53INP1Q96A56 240 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 TXNDC15Q96J42 360 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 WACQ9BTA9 647 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CENPOQ9BU64 300 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 CCDC32Q9BV29 185 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 ZDHHC3Q9NYG2 299 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 PCDHB11Q9Y5F2 797 aa12.04□□□□□ -0.48
RIOK3-201ENST00000339486 COL16A1Q07092 1604 aaPredicted RBP12.04□□□□□ -0.48
RIOK3-201ENST00000339486 JRKO75564 520 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 C6orf47O95873 294 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 FHP07954 510 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 SDC1P18827 310 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 TNFSF8P32971 234 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 ABATP80404 500 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 HSPB3Q12988 150 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 BTG3Q14201 252 aaPredicted RBP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 NFE2L1Q14494 772 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 FAM214AQ32MH5 1076 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 SETMARQ53H47 684 aaPredicted RBP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 FAM92BQ6ZTR7 304 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 AMIGO1Q86WK6 493 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 PCSK9Q8NBP7 692 aaKnown RBP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 ACPTQ9BZG2 426 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 UCK2Q9BZX2 261 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 CLMPQ9H6B4 373 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 ASPDHA6ND91 283 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 WASH4PA8MWX3 477 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 I3L521 148 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 OR7A17O14581 309 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 CDK1P06493 297 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 ETFAP13804 333 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 PGFP49763 221 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 CTSL3PQ5NE16 218 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 C22orf42Q6IC83 251 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 CCDC28AQ8IWP9 274 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 NXPE1Q8N323 547 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 UFD1Q92890 307 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 EXOSC8Q96B26 276 aaKnown RBP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 TADA1Q96BN2 335 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 RHBDF1Q96CC6 855 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 TMEM80Q96HE8 168 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 FBXO8Q9NRD0 319 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 ERVW-1Q9UQF0 538 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 MICAL3Q7RTP6 2002 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 MEIOCA2RUB1 952 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 MBLAC1A4D2B0 266 aaPredicted RBP12.03□□□□□ -0.48
RIOK3-201ENST00000339486 METTL15A6NJ78 407 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 C12orf71A8MTZ7 269 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 SYN3O14994 580 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 OR2B3O76000 313 aa12.03□□□□□ -0.48
RIOK3-201ENST00000339486 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms