RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF446Q9NWS9 450 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 TRPS1Q9UHF7 1281 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 SNX6Q9UNH7 406 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 TSC22D4Q9Y3Q8 395 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 SLC22A7Q9Y694 548 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 PTPRBP23467 1997 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 A0A1B0GX78 115 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 C1QTNF9BB2RNN3 333 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 PPP6CO00743 305 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 CRCPO75575 148 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 OR4F21O95013 312 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ESRRBO95718 433 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KRT6AP02538 564 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 STATHP02808 62 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KRT6BP04259 564 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ENO1P06733 434 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 C1QTNF9P0C862 333 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 DHRS4L1P0CG22 281 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 PTX3P26022 381 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 HMOX2P30519 316 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SERPINB5P36952 375 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 AVPR1BP47901 424 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KRT6CP48668 564 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SKP1P63208 163 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 CYP4F2P78329 520 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 TRAF3Q13114 568 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 HERC3Q15034 1050 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 GGTA1PQ4G0N0 100 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 TTMPQ5BVD1 217 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 C1orf189Q5VU69 101 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 FRMD7Q6ZUT3 714 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 TIPARPQ7Z3E1 657 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 DTX1Q86Y01 620 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 TRIM42Q8IWZ5 723 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 DSELQ8IZU8 1212 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SLC38A9Q8NBW4 561 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KCT2Q8NC54 265 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SRFBP1Q8NEF9 429 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MGARPQ8TDB4 240 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KCNE4Q8WWG9 221 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 NKD1Q969G9 470 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 KIAA1143Q96AT1 154 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MTFMTQ96DP5 389 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MOCOSQ96EN8 888 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 FAR2Q96K12 515 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MACROD1Q9BQ69 325 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 CENPKQ9BS16 269 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 EFHD1Q9BUP0 239 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MECRQ9BV79 373 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 TMEM121BQ9BXQ6 578 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 FAM117AQ9C073 453 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ELOVL6Q9H5J4 265 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ANKHQ9HCJ1 492 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 MID1IP1Q9NPA3 183 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 LHX9Q9NQ69 397 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 NMRK1Q9NWW6 199 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 PSD3Q9NYI0 1048 aa11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 DHCR7Q9UBM7 475 aaKnown RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 GPN3Q9UHW5 284 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 COL27A1Q8IZC6 1860 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-202ENST00000337841 A0A088AWK7 358 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 LRIT2A6NDA9 550 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 C9J4A7 227 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 FOXE1O00358 373 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 FFAR3O14843 346 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 GPR42O15529 346 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 P2RX6O15547 441 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 ULK1O75385 1050 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 CAPNS1P04632 268 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 SERPINE1P05121 402 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 TCN2P20062 427 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 ZNF10P21506 573 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 GRK2P25098 689 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 RORAP35398 523 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 GCGRP47871 477 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 RPS15P62841 145 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 DDX39BQ13838 428 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 NKAIN1Q4KMZ8 207 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 SGO1Q5FBB7 561 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 TOR1AIP1Q5JTV8 583 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 FRG2Q64ET8 278 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 LRRC69Q6ZNQ3 347 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 SYVN1Q86TM6 617 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 CDYL2Q8N8U2 506 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 HUS1BQ8NHY5 278 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 ZNF473Q8WTR7 871 aaKnown RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 RNF31Q96EP0 1072 aa11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 MMABQ96EY8 250 aaPredicted RBP11.33□□□□□ -0.6
SPTLC1-202ENST00000337841 NAF1Q96HR8 494 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms