RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM98BQ52LJ0 330 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 RBM44Q6ZP01 1051 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 DEFB119Q8N690 84 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TRAPPC9Q96Q05 1148 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 SPATA6Q9NWH7 488 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 SCN3AQ9NY46 2000 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PSMD11O00231 422 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 GPIP06744 558 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 IL3P08700 152 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 SLC35G4P0C7Q5 338 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 ACSL1P33121 698 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 OR1E2P47887 323 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 TMED1Q13445 227 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 UAP1L1Q3KQV9 507 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 GGTA1PQ4G0N0 100 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 PPP4R4Q6NUP7 873 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 TTC23LQ6PF05 361 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 NCCRP1Q6ZVX7 275 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 RTL10Q7L3V2 364 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 VN1R5Q7Z5H4 357 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 NAGSQ8N159 534 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 LINC01555Q8NAE3 123 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 HM13Q8TCT9 377 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 KCNH6Q9H252 994 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 RMND5AQ9H871 391 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 SCHIP1Q9P0W5 487 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 NDRG2Q9UN36 371 aaKnown RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 OR1F1O43749 312 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 LCMT2O60294 686 aaKnown RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 RNGTTO60942 597 aaKnown RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 RPS9P46781 194 aaKnown RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 MERTKQ12866 999 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 MLF2Q15773 248 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 ATP6AP1Q15904 470 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 FAM46CQ5VWP2 391 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 NXPE4Q6UWF7 544 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 SLC7A5P1Q8MH63 180 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 ANKRD53Q8N9V6 530 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 IL17RCQ8NAC3 791 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 GLB1L3Q8NCI6 653 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 CSGALNACT1Q8TDX6 532 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 ZFAND2BQ8WV99 257 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 UHRF1Q96T88 793 aaPredicted RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 DMRT3Q9NQL9 472 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 PRELID1Q9Y255 219 aa12.08□□□□□ -0.48
LIMK1-201ENST00000336180 RUVBL1Q9Y265 456 aaKnown RBP12.08□□□□□ -0.48
LIMK1-201ENST00000336180 PLXND1Q9Y4D7 1925 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 UPK1AO00322 258 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 HS6ST1O60243 411 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PFDN1O60925 122 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SCN2BO60939 215 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 IL7RP16871 459 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 HBA1P69905 142 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 BCL7AQ4VC05 210 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF761Q86XN6 746 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PGBD3Q8N328 593 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 OR8J3Q8NGG0 315 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PDXPQ96GD0 296 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TPT1P8Q9HAU6 139 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 FGF22Q9HCT0 170 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 OLAHQ9NV23 265 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 FZD4Q9ULV1 537 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SCN2AQ99250 2005 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 DMDP11532 3685 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 A0A096LPI6 279 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TRBV5-3A0A0A0MS03 114 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 EVPLLA8MZ36 301 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 QSOX1O00391 747 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SCAMP2O15127 329 aaKnown RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 EPN2O95208 641 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 DNTTP04053 509 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PRPS1L1P21108 318 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TIA1P31483 386 aaKnown RBP eCLIP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 IGFALSP35858 605 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SNRPNP63162 240 aaKnown RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 DUOXA1Q1HG43 343 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 MPEG1Q2M385 716 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 CNPY1Q3B7I2 92 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TTC33Q6PID6 262 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TMIGD1Q6UXZ0 262 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PROSER1Q86XN7 944 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TBC1D21Q8IYX1 336 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 TRIML2Q8N7C3 387 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 RNF31Q96EP0 1072 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 C19orf43Q9BQ61 176 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SLC17A9Q9BYT1 436 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 RSPH9Q9H1X1 276 aaPredicted RBP12.07□□□□□ -0.48
LIMK1-201ENST00000336180 H0YIV9 168 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 H3BSA7 217 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PRAMEF10O60809 474 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 IDSP22304 550 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 MAPK1P28482 360 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 SHMT2P34897 504 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PIGAP37287 484 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 ZNF750Q32MQ0 723 aa12.07□□□□□ -0.48
LIMK1-201ENST00000336180 PDZD3Q86UT5 571 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms