RNA–Protein interactions for RNA: ENST00000333628.3

TUBB2A-201, Transcript of tubulin beta 2A class IIa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB2A, Length 1,595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB2A-201ENST00000333628 C6orf10Q5SRN2 563 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 CDCP2Q5VXM1 449 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 CLEC6AQ6EIG7 209 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 PPP4R4Q6NUP7 873 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 BLOC1S3Q6QNY0 202 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 NEK10Q6ZWH5 1172 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 RNF148Q8N7C7 305 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 OR10G6Q8NH81 332 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 WDR48Q8TAF3 677 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 ATP6V1E2Q96A05 226 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 PDLIM5Q96HC4 596 aaKnown RBP12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 AHCYL2Q96HN2 611 aaKnown RBP12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 NRTNQ99748 197 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 HGH1Q9BTY7 390 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 SYNDIG1Q9H7V2 258 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 RIC8BQ9NVN3 520 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 UBAP1Q9NZ09 502 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 ACTR3BQ9P1U1 418 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 POLG2Q9UHN1 485 aa12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 TDRKHQ9Y2W6 561 aaKnown RBP12.93□□□□□ -0.34
TUBB2A-201ENST00000333628 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 UBXN8O00124 270 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 EIF3FO00303 357 aaPredicted RBP12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 PIP5K1BO14986 540 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 UBXN7O94888 489 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 TFAP2AP05549 437 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 AMD1P17707 334 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 TCN1P20061 433 aaPredicted RBP12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 IL10P22301 178 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 PPM1FP49593 454 aaPredicted RBP12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 RGS4P49798 205 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 SLC7A2P52569 658 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 TUBA4AP68366 448 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 GPLD1P80108 840 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 CFHR1Q03591 330 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 SPIDRQ14159 915 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 PLCL1Q15111 1095 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 TMPRSS9Q7Z410 1059 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 CHERPQ8IWX8 916 aaKnown RBP12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 DCBLD1Q8N8Z6 715 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 OR4E2Q8NGC2 313 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 OR52E1Q8NGJ3 308 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 LCN9Q8WX39 176 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 ASB11Q8WXH4 323 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 C3orf30Q96M34 536 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 FOPNLQ96NB1 174 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 RDH14Q9HBH5 336 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 ZIM2Q9NZV7 527 aa12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
TUBB2A-201ENST00000333628 A0A1W2PP18 115 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 SUPT3HB4E1H0 165 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 GFYI3L273 518 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PSIP1O75475 530 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 SUPT3HO75486 399 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 CRCPO75575 148 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 C1orf105O95561 183 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 CPNE6O95741 557 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 TSPAN12O95859 305 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 RPN2P04844 631 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PROS1P07225 676 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PCSK2P16519 638 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 MSX2P35548 267 aaPredicted RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 EEFSECP57772 596 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 GRB7Q14451 532 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PDCD4Q53EL6 469 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 TTC23LQ6PF05 361 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 ZNF574Q6ZN55 896 aaPredicted RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PTRH1Q86Y79 214 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 RASGRP3Q8IV61 690 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 TUBGCP3Q96CW5 907 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 LRRC58Q96CX6 371 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 LINGO1Q96FE5 620 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 CNBD2Q96M20 576 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 NUDT22Q9BRQ3 303 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 ANKRD60Q9BZ19 345 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 SRMSQ9H3Y6 488 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 XKR8Q9H6D3 395 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 PNPLA3Q9NST1 481 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 TUBA8Q9NY65 449 aaPredicted RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 MAP10Q9P2G4 905 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 RALYQ9UKM9 306 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 TNPO3Q9Y5L0 923 aaKnown RBP12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 GPR45Q9Y5Y3 372 aa12.91□□□□□ -0.34
TUBB2A-201ENST00000333628 OR6C74A6NCV1 312 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 DUX1O43812 170 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 CSO75390 466 aaKnown RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 HGFP14210 728 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 PSMA4P25789 261 aaKnown RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 BDKRB1P46663 353 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 CDH13P55290 713 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 KCNK10P57789 538 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 MYBPC1Q00872 1141 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 RCAN2Q14206 197 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 SMU1Q2TAY7 513 aa12.9□□□□□ -0.34
TUBB2A-201ENST00000333628 CCSMST1Q4G0I0 132 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms