RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ZNF600Q6ZNG1 722 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 SPATA19Q7Z5L4 167 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 PIANPQ8IYJ0 282 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 BOLLQ8N9W6 283 aaKnown RBP11.48□□□□□ -0.57
LIMK2-202ENST00000333611 DUS3LQ96G46 650 aaKnown RBP11.48□□□□□ -0.57
LIMK2-202ENST00000333611 DPY30Q9C005 99 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 ARNT2Q9HBZ2 717 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 MARCH2Q9P0N8 246 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 PKP3Q9Y446 797 aa11.48□□□□□ -0.57
LIMK2-202ENST00000333611 ISM1B1AKI9 464 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 CACNG3O60359 315 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 B3GALT4O96024 378 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 IRF1P10914 325 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 CTPS1P17812 591 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 GRIK2Q13002 908 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 SPANXN4Q5MJ08 99 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 DNAJB8Q8NHS0 232 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 KIAA1191Q96A73 305 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 CINPQ9BW66 212 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 TFB2MQ9H5Q4 396 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 B3GNT2Q9NY97 397 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF225Q9UK10 706 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 DUSP12Q9UNI6 340 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 NEU3Q9UQ49 428 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 FAM234BA2RU67 622 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 B4DXG7 233 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 C9P02748 559 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ATXN1LP0C7T5 689 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PPP3CCP48454 512 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 EPHA5P54756 1037 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 DSC1Q08554 894 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 USP39Q53GS9 565 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PTRHD1Q6GMV3 140 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 C16orf59Q7L2K0 433 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PLEKHH3Q7Z736 793 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 KLHDC9Q8NEP7 349 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 NLGN4YQ8NFZ3 816 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 OR9Q1Q8NGQ5 310 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 SMG7Q92540 1137 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 FAM120BQ96EK7 910 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 LIN7BQ9HAP6 207 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PRSS44E7EML9 344 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 TO15178 435 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 GMDSO60547 372 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 NDUFS6O75380 124 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 EEDO75530 441 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 MATN4O95460 622 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 SYPP08247 313 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 FGF4P08620 206 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 AKT1P31749 480 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PIK3CBP42338 1070 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 PRKCDQ05655 676 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ABRAXAS2Q15018 415 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 CPSF6Q16630 551 aaKnown RBP eCLIP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 MSANTD2Q6P1R3 559 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 OR4F6Q8NGB9 312 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ARRDC2Q8TBH0 407 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 MYEOVQ96EZ4 313 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 LINC00052Q96N35 136 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF599Q96NL3 588 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 TSSK3Q96PN8 268 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 SPRTNQ9H040 489 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 IKZF5Q9H5V7 419 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 NSUN3Q9H649 340 aaKnown RBP11.47□□□□□ -0.57
LIMK2-202ENST00000333611 IPPKQ9H8X2 491 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 TM9SF3Q9HD45 589 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 CLEC4AQ9UMR7 237 aa11.47□□□□□ -0.57
LIMK2-202ENST00000333611 A0A0G2JPF8 293 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 A0A1B0GVC2 190 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 A6NIN4 97 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 SLC30A4O14863 429 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 MYL12BO14950 172 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 SGCEO43556 437 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 MYL12AP19105 171 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 MAN2A2P49641 1150 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 MAZP56270 477 aaKnown RBP11.46□□□□□ -0.57
LIMK2-202ENST00000333611 CAV3P56539 151 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
LIMK2-202ENST00000333611 NKG7Q16617 165 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 UPP1Q16831 310 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 CREB3L2Q70SY1 520 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF605Q86T29 641 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 ADAM2Q99965 735 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 CCM2Q9BSQ5 444 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 TINAGL1Q9GZM7 467 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-202ENST00000333611 WWOXQ9NZC7 414 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF624Q9P2J8 865 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-202ENST00000333611 PCTPQ9UKL6 214 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 PAPPA2Q9BXP8 1791 aa11.46□□□□□ -0.57
LIMK2-202ENST00000333611 TRBV23-1A0A0A0MS06 115 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 C2orf81A6NN90 581 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 ATG13O75143 517 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 VPS4BO75351 444 aa11.46□□□□□ -0.58
LIMK2-202ENST00000333611 MLYCDO95822 493 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms