RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 SAC3D1A6NKF1 404 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 CLIC1O00299 241 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 OR1F1O43749 312 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 RASGRP1O95267 797 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 MED21Q13503 144 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 PRSS53Q2L4Q9 553 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 DEPDC1Q5TB30 811 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 KHDRBS2Q5VWX1 349 aaKnown RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 FAM71E1Q6IPT2 247 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 LPCAT2Q7L5N7 544 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 ADCK2Q7Z695 626 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 MSANTD3Q96H12 275 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 RNF145Q96MT1 663 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 MS4A8Q9BY19 250 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 NT5DC2Q9H857 520 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 POLMQ9NP87 494 aaPredicted RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 BTNL2Q9UIR0 455 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 CYP8B1Q9UNU6 501 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 MAPRE3Q9UPY8 281 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 PCDHB11Q9Y5F2 797 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 ARHGAP10A1A4S6 786 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 RTCAO00442 366 aaKnown RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 SOX1O00570 391 aaPredicted RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 PLPP1O14494 284 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 SCELO95171 688 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 IGHV4-34P06331 123 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 CHRNB1P11230 501 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 TPP2P29144 1249 aaPredicted RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 SRP54P61011 504 aaKnown RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 SLC30A9Q6PML9 568 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 Q6ZSR6 202 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 CLEC4FQ8N1N0 589 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 FAM86B1Q8N7N1 296 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 FAM162AQ96A26 154 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 NR1H4Q96RI1 486 aaPredicted RBP17.13■□□□□ 0.33
ACTB-201ENST00000331789 CHID1Q9BWS9 393 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 RAB11FIP5Q9BXF6 653 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 MYNNQ9NPC7 610 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 SPHK1Q9NYA1 384 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 CA14Q9ULX7 337 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 LRP4O75096 1905 aa17.13■□□□□ 0.33
ACTB-201ENST00000331789 C7orf72A4D263 438 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 EVPLLA8MZ36 301 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 C10orf142B7Z368 130 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 AXIN1O15169 862 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 PRICKLE3O43900 615 aaPredicted RBP17.12■□□□□ 0.33
ACTB-201ENST00000331789 FURINP09958 794 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 PEBP1P30086 187 aaKnown RBP17.12■□□□□ 0.33
ACTB-201ENST00000331789 ABHD18Q0P651 414 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 ALG11Q2TAA5 492 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 C6orf52Q5T4I8 152 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 ABRAXAS1Q6UWZ7 409 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 MMP21Q8N119 569 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 FRMD1Q8N878 549 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 FBXO30Q8TB52 745 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 PNPT1Q8TCS8 783 aaKnown RBP17.12■□□□□ 0.33
ACTB-201ENST00000331789 NETO1Q8TDF5 533 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 CENPNQ96H22 339 aaPredicted RBP17.12■□□□□ 0.33
ACTB-201ENST00000331789 ZNF717Q9BY31 904 aaPredicted RBP17.12■□□□□ 0.33
ACTB-201ENST00000331789 VCXQ9H320 206 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 HEBP2Q9Y5Z4 205 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 COLEC10Q9Y6Z7 277 aa17.12■□□□□ 0.33
ACTB-201ENST00000331789 SOCS2O14508 198 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 CREG1O75629 220 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 EPN2O95208 641 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 IL3P08700 152 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 ACTR1BP42025 376 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 ACTR1AP61163 376 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 SMAD2Q15796 467 aaKnown RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 CCNYL2Q5T2Q4 361 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 ZBTB49Q6ZSB9 765 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 TMEM145Q8NBT3 493 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 VPS37AQ8NEZ2 397 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 NCLNQ969V3 563 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 CIDECQ96AQ7 238 aaPredicted RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 CXorf40BQ96DE9 158 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 TOE1Q96GM8 510 aaKnown RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 KIR3DX1Q9H7L2 352 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 SLC6A20Q9NP91 592 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 MRPS30Q9NP92 439 aaKnown RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 AHSPQ9NZD4 102 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 ZNF624Q9P2J8 865 aaPredicted RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 SPASTQ9UBP0 616 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 RAB26Q9ULW5 256 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 HS3ST3A1Q9Y663 406 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 PDLIM1O00151 329 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 MAN2B1O00754 1011 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 TNFRSF10CO14798 259 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 DENRO43583 198 aaKnown RBP17.11■□□□□ 0.33
ACTB-201ENST00000331789 FCGR1AP12314 374 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 BSGP35613 385 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 CCT8P50990 548 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 DGKEP52429 567 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 YPEL5P62699 121 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 PDE7AQ13946 482 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 NKG7Q16617 165 aa17.11■□□□□ 0.33
ACTB-201ENST00000331789 KIAA0895LQ68EN5 471 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms