RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TMEM198Q66K66 360 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 GRHL2Q6ISB3 625 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 MBOAT1Q6ZNC8 495 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 FAM92BQ6ZTR7 304 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 BMPERQ8N8U9 685 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 LMNTD1Q8N9Z9 388 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 RBM15BQ8NDT2 890 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 OR4E2Q8NGC2 313 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 OR5AR1Q8NGP9 310 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 SNIP1Q8TAD8 396 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 ZNF480Q8WV37 535 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 UBE2E3Q969T4 207 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 ZNF578Q96N58 590 aaPredicted RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 FERD3LQ96RJ6 166 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 EFCAB11Q9BUY7 163 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 MRPL1Q9BYD6 325 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 PITHD1Q9GZP4 211 aaPredicted RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 ELOVL6Q9H5J4 265 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 XKR8Q9H6D3 395 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 KIR3DX1Q9H7L2 352 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 NOP53Q9NZM5 478 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 RALYQ9UKM9 306 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 TSC22D4Q9Y3Q8 395 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 DYRK1BQ9Y463 629 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 MN1Q10571 1320 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 ZW10O43264 779 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 RSL1D1O76021 490 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 JMJD7P0C870 316 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 EPORP19235 508 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 MAPK1P28482 360 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 BDKRB1P46663 353 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CAPZBP47756 277 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 RAP1GDS1P52306 607 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 KCNJ2P63252 427 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CSTF3Q12996 717 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CHIT1Q13231 466 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 TGIF1Q15583 401 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CYP2A13Q16696 494 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 HIST2H2ACQ16777 129 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 IMPG1Q17R60 797 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 C6orf163Q5TEZ5 329 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 HIST2H2AA3Q6FI13 130 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 LCTLQ6UWM7 567 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 HACD2Q6Y1H2 254 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 RINLQ6ZS11 566 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 Q6ZSR9 355 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 RBM12BQ8IXT5 1001 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 SYTL1Q8IYJ3 562 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 AVL9Q8NBF6 648 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 PCYOX1LQ8NBM8 494 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CDK15Q96Q40 435 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CMKLR1Q99788 373 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CADM1Q9BY67 442 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 ATG10Q9H0Y0 220 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 BRF2Q9HAW0 419 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 APMAPQ9HDC9 416 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 CCDC177Q9NQR7 707 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 INTS7Q9NVH2 962 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 AIG1Q9NVV5 245 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 NMRK1Q9NWW6 199 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 ADGRE2Q9UHX3 823 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 ZNF490Q9ULM2 529 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 PRPF19Q9UMS4 504 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 EIF3LQ9Y262 564 aaKnown RBP15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 BTRCQ9Y297 605 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 NDUFAF1Q9Y375 327 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 RNF11Q9Y3C5 154 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 COLEC10Q9Y6Z7 277 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 SPTBP11277 2137 aa15.76■□□□□ 0.11
PDLIM1-201ENST00000329399 KCNE1BA0A087WTH5 132 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 A0A087WV48 116 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 IGHV5-51A0A0C4DH38 117 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 ATP6AP2A0A1C7CYW4 349 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 OR6C74A6NCV1 312 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 EFCAB7A8K855 629 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 LSM1O15116 133 aaKnown RBP15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 ATP6AP2O75787 350 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 GPX3P22352 226 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 PGM1P36871 562 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 SEPHS1P49903 392 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 ELF3P78545 371 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 EIF3IQ13347 325 aaKnown RBP15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 TRA2AQ13595 282 aaKnown RBP eCLIP15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 ZXDCQ2QGD7 858 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 WASHC2DQ5SRD0 308 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 FRG2Q64ET8 278 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 IRGCQ6NXR0 463 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 SNX32Q86XE0 403 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 PLXDC1Q8IUK5 500 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 C10orf67Q8IYJ2 551 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 KIF2BQ8N4N8 673 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 HMGCLL1Q8TB92 370 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 FRG2BQ96QU4 278 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 SERPINI1Q99574 410 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 CTRCQ99895 268 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 DPYSL5Q9BPU6 564 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 ZMYND15Q9H091 742 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 CIDEBQ9UHD4 219 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 MAPRE3Q9UPY8 281 aa15.75■□□□□ 0.11
PDLIM1-201ENST00000329399 GPR45Q9Y5Y3 372 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms