RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 TRAM1L1Q8N609 369 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 C11orf65Q8NCR3 313 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF480Q8WV37 535 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 PROX1Q92786 737 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 OR2AG1Q9H205 316 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 TRIM39Q9HCM9 518 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 RLIMQ9NVW2 624 aa16.76■□□□□ 0.27
COL9A1-201ENST00000320755 TRNAU1APQ9NX07 287 aaKnown RBP16.76■□□□□ 0.27
COL9A1-201ENST00000320755 K7ESM1 405 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ADH1AP07327 375 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 SYN1P17600 705 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 CDH12P55289 794 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ITGA1P56199 1179 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 SLBPQ14493 270 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF740Q8NDX6 193 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 WDR48Q8TAF3 677 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 UTP15Q8TED0 518 aaKnown RBP16.75■□□□□ 0.27
COL9A1-201ENST00000320755 FBLIM1Q8WUP2 373 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 DNASE1L2Q92874 299 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF347Q96SE7 839 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TCF25Q9BQ70 676 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 GABARAPL1Q9H0R8 117 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ACOT13Q9NPJ3 140 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TBCCD1Q9NVR7 557 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 IL36AQ9UHA7 158 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 PRKAB1Q9Y478 270 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TMEM247A6NEH6 219 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TNFRSF11BO00300 401 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF197O14709 1029 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 UGDHO60701 494 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 WBP4O75554 376 aaKnown RBP16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ASMTP46597 345 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TBPL1P62380 186 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 MVKQ03426 396 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 LILRA6Q6PI73 481 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 TRMT11Q7Z4G4 463 aaKnown RBP16.75■□□□□ 0.27
COL9A1-201ENST00000320755 HOMEZQ8IX15 550 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF566Q969W8 418 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 ZSWIM3Q96MP5 696 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 EXO1Q9UQ84 846 aaKnown RBP16.75■□□□□ 0.27
COL9A1-201ENST00000320755 SH3GLB1Q9Y371 365 aa16.75■□□□□ 0.27
COL9A1-201ENST00000320755 GCM2O75603 506 aaPredicted RBP16.74■□□□□ 0.27
COL9A1-201ENST00000320755 AP2A2O94973 939 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 GABARAPO95166 117 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 GNRH1P01148 92 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 SEMG1P04279 462 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 CD36P16671 472 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 TIA1P31483 386 aaKnown RBP eCLIP16.74■□□□□ 0.27
COL9A1-201ENST00000320755 SOAT1P35610 550 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 C2orf80Q0P641 193 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 NEK10Q6ZWH5 1172 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 ENTHD1Q8IYW4 607 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 SLC5A8Q8N695 610 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 NFKBIDQ8NI38 313 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 CHTF18Q8WVB6 975 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 FCRL1Q96LA6 429 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 SLC35A5Q9BS91 424 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 DOHHQ9BU89 302 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 SORBS1Q9BX66 1292 aaKnown RBP16.74■□□□□ 0.27
COL9A1-201ENST00000320755 RC3H2Q9HBD1 1191 aaKnown RBP16.74■□□□□ 0.27
COL9A1-201ENST00000320755 PCM1Q15154 2024 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 C1orf226A1L170 272 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 J3KTA2 159 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 CCL5P13501 91 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 FUT4P22083 530 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 ERVFC1P60507 584 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 KCNC3Q14003 757 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 VEZF1Q14119 521 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 MAPK11Q15759 364 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 LIPIQ6XZB0 460 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 ARMCX6Q7L4S7 300 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 FAM124AQ86V42 546 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 MMP21Q8N119 569 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 NRTNQ99748 197 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 HMG20AQ9NP66 347 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 GPATCH2Q9NW75 528 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 PCDHGB3Q9Y5G1 929 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 COL4A6Q14031 1691 aa16.74■□□□□ 0.27
COL9A1-201ENST00000320755 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 NPIPB8E9PQR5 432 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 NPC1O15118 1278 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SULT1C4O75897 302 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 KLK1P06870 262 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 HLA-EP13747 358 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 HOXB6P17509 224 aaKnown RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 JUNDP17535 347 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 CYP4F2P78329 520 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 HTRA3P83110 453 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SPIBQ01892 262 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 ZNF846Q147U1 533 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 ANXA8L1Q5VT79 327 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SLCO4C1Q6ZQN7 724 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 PAGE2Q7Z2X7 111 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 COMMD6Q7Z4G1 85 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 SLC44A2Q8IWA5 706 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 POP5Q969H6 163 aaKnown RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 TIFAQ96CG3 184 aa16.73■□□□□ 0.27
COL9A1-201ENST00000320755 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
COL9A1-201ENST00000320755 MAGEB10Q96LZ2 347 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms