RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 IL10P22301 178 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FASP25445 335 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 IL12AP29459 219 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 PFN3P60673 137 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 RPS14P62263 151 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FGL2Q14314 439 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MAPRE2Q15555 327 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 TMEM196Q5HYL7 178 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 TMEM31Q5JXX7 168 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 LRRC70Q7Z2Q7 622 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 PIWIL3Q7Z3Z3 882 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SPATA19Q7Z5L4 167 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 C11orf96Q7Z7L8 435 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SLC22A15Q8IZD6 547 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MIER2Q8N344 545 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 NUDT8Q8WV74 236 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CANT1Q8WVQ1 401 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FBXL20Q96IG2 436 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CENPOQ9BU64 300 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SLC25A23Q9BV35 468 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 BRINP2Q9C0B6 783 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ATG10Q9H0Y0 220 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ACTL8Q9H568 366 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 TRIM39Q9HCM9 518 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MAP10Q9P2G4 905 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ZFR2Q9UPR6 939 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 WBP11Q9Y2W2 641 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 A0A1W2PP55 124 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FAM25AB3EWG3 89 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FAM25CB3EWG5 89 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FAM25GB3EWG6 89 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CCRL2O00421 344 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 NR5A2O00482 541 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MRASO14807 208 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CCNKO75909 580 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 WDR47O94967 919 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 KCNK2O95069 426 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 EGFP01133 1207 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 EBLN1P0CF75 366 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FCGR1AP12314 374 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CYP2A7P20853 494 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 CTHP32929 405 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 TNFRSF4P43489 277 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 UFM1P61960 85 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ERVK-8P63133 956 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 WSCD2Q2TBF2 565 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SYTL3Q4VX76 610 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 FAM46CQ5VWP2 391 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MTSS1LQ765P7 747 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 LYSMD2Q8IV50 215 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 USP7Q93009 1102 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MUL1Q969V5 352 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MARVELD3Q96A59 401 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF639Q9UID6 485 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MOSPD1Q9UJG1 213 aa12.58□□□□□ -0.4
CPNE1-201ENST00000317677 MUC3AQ02505 3323 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 F5P12259 2224 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 MANBAO00462 879 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 ZW10O43264 779 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 NADKO95544 446 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 ITPKAP23677 461 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 AP1S2P56377 157 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 VPS26BQ4G0F5 336 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 RFTN2Q52LD8 501 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 PAGE2BQ5JRK9 111 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 RSBN1Q5VWQ0 802 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 LAYNQ6UX15 382 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 FAM83HQ6ZRV2 1179 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 RNF165Q6ZSG1 346 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 TRAPPC5Q8IUR0 188 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 HDDC3Q8N4P3 179 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 OR6F1Q8NGZ6 308 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 TMEM159Q96B96 161 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 SDCCAG3Q96C92 435 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 COQ7Q99807 217 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 TRIM15Q9C019 465 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 MBNL1Q9NR56 388 aaKnown RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 HEBP1Q9NRV9 189 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 GMPR2Q9P2T1 348 aaKnown RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 ZMAT5Q9UDW3 170 aaKnown RBP12.57□□□□□ -0.4
CPNE1-201ENST00000317677 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 SLC22A14Q9Y267 594 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 PRKAB1Q9Y478 270 aa12.57□□□□□ -0.4
CPNE1-201ENST00000317677 TEX51A0A1B0GUA7 166 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 FXYD1O00168 92 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 ANKRD28O15084 1053 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 GPR37L1O60883 481 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 TMCC2O75069 709 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 GABARAPO95166 117 aa12.56□□□□□ -0.4
CPNE1-201ENST00000317677 PCCBP05166 539 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms