RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 KCNAB2Q13303 367 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 MAPKAPK3Q16644 382 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 PLEKHS1Q5SXH7 462 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 ZNF773Q6PK81 442 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 KIAA1324Q6UXG2 1013 aaKnown RBP7.33□□□□□ -1.24
TRIM55-202ENST00000315962 SPATA19Q7Z5L4 167 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 MMP21Q8N119 569 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 CADM3Q8N126 398 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 MINDY1Q8N5J2 469 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 DEFB119Q8N690 84 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 ARL10Q8N8L6 244 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 IL17RCQ8NAC3 791 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 SH3KBP1Q96B97 665 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 FOPNLQ96NB1 174 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 GDF15Q99988 308 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 HOPXQ9BPY8 73 aaPredicted RBP7.33□□□□□ -1.24
TRIM55-202ENST00000315962 NTMT1Q9BV86 223 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 NUSAP1Q9BXS6 441 aaKnown RBP7.33□□□□□ -1.24
TRIM55-202ENST00000315962 S1PR5Q9H228 398 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 C1orf109Q9NX04 203 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 GPRC5BQ9NZH0 403 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 POU2F3Q9UKI9 436 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 BAG5Q9UL15 447 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 ERVK-11Q9UQG0 969 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 EIF3LQ9Y262 564 aaKnown RBP7.33□□□□□ -1.24
TRIM55-202ENST00000315962 BTBD3Q9Y2F9 522 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 GPSM3Q9Y4H4 160 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 MYO10Q9HD67 2058 aa7.33□□□□□ -1.24
TRIM55-202ENST00000315962 GNG14A0A1W2PPG7 69 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 WASHC1A8K0Z3 465 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 RTCAO00442 366 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 LILRB5O75023 590 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SULT1C4O75897 302 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 FADS2O95864 444 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CST1P01037 141 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CATP04040 527 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 NPPBP16860 134 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ACSL1P33121 698 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 HOXD12P35452 270 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 KIR2DL1P43626 348 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PTPN5P54829 565 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 DCDC1P59894 354 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PPP2CBP62714 309 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PPP2CAP67775 309 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 MC1RQ01726 317 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SGCGQ13326 291 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ADAM15Q13444 863 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 GTF2H3Q13889 308 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 KIAA0040Q15053 153 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 EIF4HQ15056 248 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 MOGQ16653 247 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 HKDC1Q2TB90 917 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CACHD1Q5VU97 1274 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 BROXQ5VW32 411 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 OR4F3Q6IEY1 312 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ANGPTL8Q6UXH0 198 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 WASH2PQ6VEQ5 465 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ADCK2Q7Z695 626 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 C11orf96Q7Z7L8 435 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 AMZ2Q86W34 360 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SFTPA2Q8IWL1 248 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CLECL1Q8IZS7 167 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CCL4L1Q8NHW4 92 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 HUS1BQ8NHY5 278 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CSGALNACT1Q8TDX6 532 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TFGQ92734 400 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ZUFSPQ96AP4 578 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TMEM121BQ9BXQ6 578 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 RDH14Q9HBH5 336 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 AMBNQ9NP70 447 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 RASSF1Q9NS23 344 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 C2orf42Q9NWW7 574 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PPT2Q9UMR5 302 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ERGIC3Q9Y282 383 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 GBF1Q92538 1859 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TSPAN11A1L157 253 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ARNTLO00327 626 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 GSTA4O15217 222 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PPM1DO15297 605 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PSIP1O75475 530 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CPSF4O95639 269 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 ALPLP05186 524 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 GSTM1P09488 218 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 HOXB3P14651 431 aaPredicted RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 HOXB2P14652 356 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SDC1P18827 310 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 CRHBPP24387 322 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 PSMB9P28065 219 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 EPHA2P29317 976 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SLC6A12P48065 614 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 GP2P55259 537 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 TPTEP56180 551 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 RPS13P62277 151 aaKnown RBP7.32□□□□□ -1.24
TRIM55-202ENST00000315962 BNIP2Q12982 314 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 SLC14A1Q13336 389 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 MADCAM1Q13477 382 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 DAG1Q14118 895 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 IRF4Q15306 451 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 LAIR1Q6GTX8 287 aa7.32□□□□□ -1.24
TRIM55-202ENST00000315962 LAIR2Q6ISS4 152 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms