RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 ZNF789Q5FWF6 425 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 OLFML2AQ68BL7 652 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 TUBA1CQ9BQE3 449 aa13.33□□□□□ -0.28
SPAST-201ENST00000315285 CCDC59Q9P031 241 aaKnown RBP13.33□□□□□ -0.28
SPAST-201ENST00000315285 CAPN14A8MX76 684 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 OAZ2O95190 189 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ZNF865P0CJ78 1059 aaPredicted RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 GLDCP23378 1020 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ACVR2AP27037 513 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 HMGCLP35914 325 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 MS4A2Q01362 244 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 KCNC4Q03721 635 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 SLC8B1Q6J4K2 584 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 KLHL24Q6TFL4 600 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ENPP7Q6UWV6 458 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 DPY19L3Q6ZPD9 716 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ATCAYQ86WG3 371 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 FAM46DQ8NEK8 389 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 UTP4Q969X6 686 aaKnown RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 EHD1Q9H4M9 534 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ANKHQ9HCJ1 492 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PKD1L3Q7Z443 1732 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 KIF13AQ9H1H9 1805 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 NME4O00746 187 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 AKT2P31751 481 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 KDELR2P33947 212 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 MEF2AQ02078 507 aaPredicted RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 ST3GAL3Q11203 375 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 TRIM74Q86UV6 250 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PIGKQ92643 395 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 FUBP1Q96AE4 644 aaKnown RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PCTPQ9UKL6 214 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 TMEM98Q9Y2Y6 226 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PCDHGA7Q9Y5G6 932 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 AURKAO14965 403 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 LDB2O43679 373 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 CNMDO75829 334 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 SERPINA3P01011 423 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 HLCSP50747 726 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 LRRTM3Q86VH5 581 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 CENPSQ8N2Z9 138 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 TCF7L1Q9HCS4 588 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 DNAJC27Q9NZQ0 273 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PCDHGB7Q9Y5F8 929 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 A0A0J9YVX5 310 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 TSPAN6O43657 245 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 ANXA2P07355 339 aaKnown RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 CLCN2P51788 898 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 BTN3A2P78410 334 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 C10orf62Q5T681 223 aaPredicted RBP13.32□□□□□ -0.28
SPAST-201ENST00000315285 TRIB2Q92519 343 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 NCSTNQ92542 709 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 RAB8BQ92930 207 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 BCL2L14Q9BZR8 327 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 MKLN1Q9UL63 735 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 PLAGL1Q9UM63 463 aa13.32□□□□□ -0.28
SPAST-201ENST00000315285 SLC16A5O15375 505 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 LEFTY1O75610 366 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 CH25HO95992 272 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 MPC1LP0DKB6 136 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ACSL1P33121 698 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ETV3P41162 512 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 DNASE1L1P49184 302 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 RAB8AP61006 207 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PIGFQ07326 219 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PRPF38BQ5VTL8 546 aaKnown RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 CMTR2Q8IYT2 770 aaKnown RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 OR56A1Q8NGH5 318 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 GPER1Q99527 375 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 MTMR10Q9NXD2 777 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PCDHGA10Q9Y5H3 936 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PRSS56P0CW18 603 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 LASP1Q14847 261 aaKnown RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 SHQ1Q6PI26 577 aaKnown RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 ATP6V1C2Q8NEY4 427 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 GRPEL2Q8TAA5 225 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 IRF7Q92985 503 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 MYRFLQ96LU7 910 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 C2orf78A6NCI8 922 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 FGF18O76093 207 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 CDRT1O95170 752 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 CAPN3P20807 821 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 GBX2P52951 348 aaPredicted RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 CDH11P55287 796 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PITPNAQ00169 270 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 AKIRIN2Q53H80 203 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 TOR1AIP1Q5JTV8 583 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ARL9Q6T311 187 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 TCEANCQ8N8B7 351 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 PNPLA1Q8N8W4 532 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 FBXO15Q8NCQ5 510 aaPredicted RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 CNDP2Q96KP4 475 aaKnown RBP13.31□□□□□ -0.28
SPAST-201ENST00000315285 SLC38A3Q99624 504 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 EVA1BQ9NVM1 165 aa13.31□□□□□ -0.28
SPAST-201ENST00000315285 EMCNQ9ULC0 261 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms