RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 NT5DC2Q9H857 520 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 COPS7BQ9H9Q2 264 aaPredicted RBP18.83■□□□□ 0.61
VEGFB-201ENST00000309422 SEMA3GQ9NS98 782 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 CFAP47Q6ZTR5 3102 aa18.83■□□□□ 0.6
VEGFB-201ENST00000309422 TLDC2A0PJX2 215 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 MKRN2OSH3BPM6 223 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 GOLGA8RI6L899 631 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PSMD12O00232 456 aaPredicted RBP18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PCDH17O14917 1159 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 KLHL41O60662 606 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 ERLIN1O75477 346 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 SERPINA6P08185 405 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 NUDT17P0C025 328 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PYGBP11216 843 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PCNAP12004 261 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 ALOX12P18054 663 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 EEF1DP29692 281 aaKnown RBP18.82■□□□□ 0.6
VEGFB-201ENST00000309422 AGTR2P50052 363 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 GTF2H2Q13888 395 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 DOC2AQ14183 400 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 RASA2Q15283 850 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PCBP2Q15366 365 aaKnown RBP eCLIP18.82■□□□□ 0.6
VEGFB-201ENST00000309422 GTF2H2CQ6P1K8 395 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 TRIM40Q6P9F5 258 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 TMEM102Q8N9M5 508 aaPredicted RBP18.82■□□□□ 0.6
VEGFB-201ENST00000309422 CLEC1AQ8NC01 280 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 KCT2Q8NC54 265 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 ZNF740Q8NDX6 193 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 OR9A4Q8NGU2 314 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 STT3BQ8TCJ2 826 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 EPS8L3Q8TE67 593 aaKnown RBP18.82■□□□□ 0.6
VEGFB-201ENST00000309422 TTC9Q92623 222 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 TM4SF19Q96DZ7 209 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 GPR78Q96P69 363 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PARD6BQ9BYG5 372 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 ADGRE2Q9UHX3 823 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 MID2Q9UJV3 735 aa18.82■□□□□ 0.6
VEGFB-201ENST00000309422 PTPRQQ9UMZ3 2332 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ARGFXA6NJG6 315 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 KLK8O60259 260 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 UGDHO60701 494 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 CLEC3AO75596 197 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 KLF7O75840 302 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 KLHL18O94889 574 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 HEXBP07686 556 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ZGLP1P0C6A0 271 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MTHFD2P13995 350 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 HNF4AP41235 474 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 KCNC1P48547 511 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 CCNG1P51959 295 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 TOR1AIP1Q5JTV8 583 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MED25Q71SY5 747 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 COX15Q7KZN9 410 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MRGPREQ86SM8 312 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SLC22A9Q8IVM8 553 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 PRSS58Q8IYP2 241 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 CCDC63Q8NA47 563 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SRFBP1Q8NEF9 429 aaKnown RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 METTL21AQ8WXB1 218 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SLC39A7Q92504 469 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MACROD1Q9BQ69 325 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SPNS1Q9H2V7 528 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ZNF358Q9NW07 568 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 TUBD1Q9UJT1 453 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 C3orf18Q9UK00 162 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 NAALAD2Q9Y3Q0 740 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 DSPP15924 2871 aaKnown RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SGK494L7N484 410 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 COPEO14579 308 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ZNF888P0CJ79 500 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 IL10P22301 178 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 JAK1P23458 1154 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MMP11P24347 488 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 KCNAB2Q13303 367 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 RCN2Q14257 317 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 MINDY4Q4G0A6 757 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 DEFB134Q4QY38 66 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 LIPJQ5W064 366 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 GRHL2Q6ISB3 625 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SHISA6Q6ZSJ9 500 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 GOLGA7Q7Z5G4 137 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 GAL3ST3Q96A11 431 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 CCDC126Q96EE4 140 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 WDR34Q96EX3 536 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SPSB2Q99619 263 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ROPN1BQ9BZX4 212 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 IPPKQ9H8X2 491 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 ROPN1Q9HAT0 212 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 HCN3Q9P1Z3 774 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 C19orf25Q9UFG5 118 aaPredicted RBP18.81■□□□□ 0.6
VEGFB-201ENST00000309422 PCDHGA11Q9Y5H2 935 aa18.81■□□□□ 0.6
VEGFB-201ENST00000309422 SNRNP200O75643 2136 aaKnown RBP18.8■□□□□ 0.6
VEGFB-201ENST00000309422 FOXS1O43638 330 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 RDH16O75452 317 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 MED26O95402 600 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 CYC1P08574 325 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 FAM87AP0C7U9 286 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 EMP2P54851 167 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 ATP1A4Q13733 1029 aa18.8■□□□□ 0.6
VEGFB-201ENST00000309422 CCDC153Q494R4 210 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms