RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 MYNNQ9NPC7 610 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 SLC6A13Q9NSD5 602 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 MAGEL2Q9UJ55 1249 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 MRPS17Q9Y2R5 130 aaKnown RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 AP4S1Q9Y587 144 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PCDHB11Q9Y5F2 797 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 COLEC10Q9Y6Z7 277 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 FAM208BQ5VWN6 2430 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 GOLGA4Q13439 2230 aaKnown RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 DMDP11532 3685 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 IGKV1-8A0A0C4DH67 115 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TCRBV5S2A0A599 114 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 KRBA1A5PL33 1030 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PEX1O43933 1283 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SH3BGRLO75368 114 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 KLHL18O94889 574 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 RASGRP1O95267 797 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TBX6O95947 436 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 COX7A2P14406 83 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 HRH2P25021 359 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CD6P30203 668 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 HPCAL1P37235 193 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CDKN2CP42773 168 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TRPC1P48995 793 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 OR4D2P58180 307 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 STARD6P59095 220 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CSNK1G2P78368 415 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 RBBP5Q15291 538 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TRIP10Q15642 601 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 DUOXA1Q1HG43 343 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 HKDC1Q2TB90 917 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 GTDC1Q4AE62 458 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 LPCAT4Q643R3 524 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TLDC1Q6P9B6 456 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 DNAJC14Q6Y2X3 702 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 RD3Q7Z3Z2 195 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SLC9B2Q86UD5 537 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SPPL2CQ8IUH8 684 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SLC22A18ASQ8N1D0 253 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TMEM132CQ8N3T6 1108 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TMEM102Q8N9M5 508 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 OR13H1Q8NG92 308 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CCL4L1Q8NHW4 92 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 BIRC7Q96CA5 298 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 COQ8BQ96D53 544 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 NAF1Q96HR8 494 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF583Q96ND8 569 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PKP2Q99959 881 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 EFHD1Q9BUP0 239 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TWSG1Q9GZX9 223 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TMEM168Q9H0V1 697 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CHRDQ9H2X0 955 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 IKZF5Q9H5V7 419 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 COPS7BQ9H9Q2 264 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CCM2LQ9NUG4 571 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ARMC1Q9NVT9 282 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF624Q9P2J8 865 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ATP6V1HQ9UI12 483 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 MCM8Q9UJA3 840 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 USP22Q9UPT9 525 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 EXO1Q9UQ84 846 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PCDHB14Q9Y5E9 798 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 DNAH14Q0VDD8 3507 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SPTBN2O15020 2390 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 USP24Q9UPU5 2620 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PRAMEF33A0A0G2JMD5 474 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 GNG14A0A1W2PPG7 69 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 TRBC2A0A5B9 178 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 DHRS12A0PJE2 317 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ANKDD1BA6NHY2 528 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 H7BY64 318 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 RFXANKO14593 260 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF217O75362 1048 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 B3GALT4O96024 378 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 GPIP06744 558 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PIM1P11309 404 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 F3P13726 295 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PEBP1P30086 187 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 SHMT2P34897 504 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ACTR1BP42025 376 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ACTR1AP61163 376 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ABATP80404 500 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PDE7AQ13946 482 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 KHDRBS2Q5VWX1 349 aaKnown RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 IZUMO2Q6UXV1 221 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ANKRD46Q86W74 232 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 CALHM3Q86XJ0 350 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 NRROSQ86YC3 692 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PHACTR4Q8IZ21 702 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF548Q8NEK5 533 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 WDR48Q8TAF3 677 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 PRAP1Q96NZ9 151 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 GBP5Q96PP8 586 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ECSITQ9BQ95 431 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ORAI3Q9BRQ5 295 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 GPR174Q9BXC1 333 aa11.38□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF717Q9BY31 904 aaPredicted RBP11.38□□□□□ -0.59
TRIM40-205ENST00000307859 KLHL4Q9C0H6 718 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms