RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 GTF2IRD2Q86UP8 949 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 LRRC49Q8IUZ0 686 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 RIMKLAQ8IXN7 391 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 METTL4Q8N3J2 472 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 PSKH2Q96QS6 385 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 BRD9Q9H8M2 597 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 SLC9A8Q9Y2E8 581 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 DHRS7Q9Y394 339 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 USP34Q70CQ2 3546 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 SERPINI2O75830 405 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 DNAJA1P31689 397 aaKnown RBP14.07□□□□□ -0.16
PTPN9-201ENST00000306726 HSPB3Q12988 150 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 EXOC3L2Q2M3D2 409 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 NOXRED1Q6NXP6 359 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF852Q6ZMS4 543 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 GLCCI1Q86VQ1 547 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 PARP16Q8N5Y8 322 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 SP7Q8TDD2 431 aaPredicted RBP14.07□□□□□ -0.16
PTPN9-201ENST00000306726 VWCEQ96DN2 955 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 TBX5Q99593 518 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 WRAP53Q9BUR4 548 aaKnown RBP14.07□□□□□ -0.16
PTPN9-201ENST00000306726 ATP6V1HQ9UI12 483 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 MAFFQ9ULX9 164 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 SCML2Q9UQR0 700 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 LYVE1Q9Y5Y7 322 aa14.07□□□□□ -0.16
PTPN9-201ENST00000306726 MTMR11A4FU01 709 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 GLOD5A6NK44 160 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 OR6C75A6NL08 312 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TSPAN12O95859 305 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 ACRP10323 421 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 ZNF24P17028 368 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 SLC15A1P46059 708 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 RPS26P11Q5JNZ5 115 aaPredicted RBP14.06□□□□□ -0.16
PTPN9-201ENST00000306726 KCNJ9Q92806 393 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 COQ7Q99807 217 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TBC1D17Q9HA65 648 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 SPG21Q9NZD8 308 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 PPT2Q9UMR5 302 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 NOTOA8MTQ0 251 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 PSMD8P48556 350 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TCTN1Q2MV58 587 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 PRR23CQ6ZRP0 262 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 CMTM8Q8IZV2 173 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 PDPRQ8NCN5 879 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 OMA1Q96E52 524 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 NIPSNAP1Q9BPW8 284 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 DUSP26Q9BV47 211 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 WDR87Q6ZQQ6 2873 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 OR6C70A6NIJ9 312 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 SLC38A8A6NNN8 435 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 STX16O14662 325 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 C6orf47O95873 294 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 GRK5P34947 590 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 CCSMST1Q4G0I0 132 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 MANEALQ5VSG8 457 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 NXNL2Q5VZ03 156 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TRAPPC5Q8IUR0 188 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TIGD4Q8IY51 512 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 AQP11Q8NBQ7 271 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 ENKURQ8TC29 256 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 XAGE5Q8WWM1 108 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 CIDECQ96AQ7 238 aaPredicted RBP14.06□□□□□ -0.16
PTPN9-201ENST00000306726 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 MROQ9BYG7 248 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 GPN2Q9H9Y4 310 aaPredicted RBP14.06□□□□□ -0.16
PTPN9-201ENST00000306726 EQTNQ9NQ60 294 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 NOX1Q9Y5S8 564 aa14.06□□□□□ -0.16
PTPN9-201ENST00000306726 H3BSH0 61 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PCDH17O14917 1159 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 RPLP0P05388 317 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 RB1P06400 928 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 DDX5P17844 614 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CTSOP43234 321 aaPredicted RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 C2orf80Q0P641 193 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 NFATC2Q13469 925 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 MAD2L1BPQ15013 274 aaPredicted RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 RAB30Q15771 203 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 VMACQ2NL98 169 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 ASB18Q6ZVZ8 466 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 GALNT12Q8IXK2 581 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CADM2Q8N3J6 435 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 TMEM169Q96HH4 297 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 POLR2J2Q9GZM3 115 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 THG1LQ9NWX6 298 aaKnown RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 TMEFF2Q9UIK5 374 aaPredicted RBP14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FAM25AB3EWG3 89 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FAM25CB3EWG5 89 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 FAM25GB3EWG6 89 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 C9P02748 559 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 GALTP07902 379 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 BMP8BP34820 402 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CSNK1DP48730 415 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 PPP5CP53041 499 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 ABHD18Q0P651 414 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 ELP6Q0PNE2 266 aa14.05□□□□□ -0.16
PTPN9-201ENST00000306726 CNTN1Q12860 1018 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms