RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 PAPD4Q6PIY7 484 aaKnown RBP19.31■□□□□ 0.68
RER1-201ENST00000306256 CRLF3Q8IUI8 442 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 ZNF740Q8NDX6 193 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 OR56A3Q8NH54 315 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 DNAJB8Q8NHS0 232 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 SNF8Q96H20 258 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 ZNF354BQ96LW1 612 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 NPAS2Q99743 824 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 OLFM1Q99784 485 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 NAT9Q9BTE0 207 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 HES7Q9BYE0 225 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 SPNS1Q9H2V7 528 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 LANCL2Q9NS86 450 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 ANKRD10Q9NXR5 420 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 SEC14L3Q9UDX4 400 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 SH3BGRL2Q9UJC5 107 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 IKZF3Q9UKT9 509 aa19.31■□□□□ 0.68
RER1-201ENST00000306256 NCOA6Q14686 2063 aaPredicted RBP19.3■□□□□ 0.68
RER1-201ENST00000306256 PABPN1LA6NDY0 278 aaKnown RBP19.3■□□□□ 0.68
RER1-201ENST00000306256 PRSS44E7EML9 344 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 GUCA1CO95843 209 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 TUBA3CQ13748 450 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 HERC3Q15034 1050 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 NSDHLQ15738 373 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 DEFB134Q4QY38 66 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 CATSPEREQ5SY80 951 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 TEDDM1Q5T9Z0 273 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 TUBA3EQ6PEY2 450 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 TRMT10BQ6PF06 316 aaKnown RBP19.3■□□□□ 0.68
RER1-201ENST00000306256 TMEM207Q6UWW9 146 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 PCGF5Q86SE9 256 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 AFAP1L2Q8N4X5 818 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 MARVELD3Q96A59 401 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 SIGLEC12Q96PQ1 595 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 WDR83Q9BRX9 315 aaKnown RBP19.3■□□□□ 0.68
RER1-201ENST00000306256 FAM129AQ9BZQ8 928 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 COPG2Q9UBF2 871 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 ENTPD4Q9Y227 616 aa19.3■□□□□ 0.68
RER1-201ENST00000306256 TRBC2A0A5B9 178 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 ZNF888P0CJ79 500 aaPredicted RBP19.29■□□□□ 0.68
RER1-201ENST00000306256 MYBL2P10244 700 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 IVDP26440 423 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 ELK3P41970 407 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 AP1S2P56377 157 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 ACTN3Q08043 901 aaPredicted RBP19.29■□□□□ 0.68
RER1-201ENST00000306256 EXT1Q16394 746 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 GALNT7Q86SF2 657 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 TICAM1Q8IUC6 712 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 SLC34A3Q8N130 599 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 MDS2Q8NDY4 140 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 PLPP5Q8NEB5 264 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 OR4K1Q8NGD4 311 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 M1APQ8TC57 530 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 FBXL8Q96CD0 374 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 TSNARE1Q96NA8 513 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 OR1F2PQ96R84 312 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 TRIM54Q9BYV2 358 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 MMP25Q9NPA2 562 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 KLHL1Q9NR64 748 aa19.29■□□□□ 0.68
RER1-201ENST00000306256 CTAGE15A4D2H0 777 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 MAGEB17A8MXT2 336 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 CCL21O00585 134 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 CES2O00748 559 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 GALR3O60755 368 aaPredicted RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 FHP07954 510 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 PRF1P14222 555 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 ALOX12P18054 663 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 CD96P40200 585 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 OR4D2P58180 307 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 USP10Q14694 798 aaKnown RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 OR1C1Q15619 314 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 MEP1AQ16819 746 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 SP5Q6BEB4 398 aaPredicted RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 FAM45BPQ6NSW5 357 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 CTAGE6Q86UF2 777 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 SRRM1Q8IYB3 904 aaKnown RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 FAM45AQ8TCE6 357 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 ITLN2Q8WWU7 325 aaPredicted RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 SLCO2A1Q92959 643 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 NEIL2Q969S2 332 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 TBC1D20Q96BZ9 403 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 CCDC120Q96HB5 630 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 LPAR4Q99677 370 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 UTP23Q9BRU9 249 aaKnown RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 SARGQ9BW04 601 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 TSPAN10Q9H1Z9 355 aaPredicted RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 TRMT1Q9NXH9 659 aaKnown RBP19.28■□□□□ 0.68
RER1-201ENST00000306256 VWA7Q9Y334 891 aa19.28■□□□□ 0.68
RER1-201ENST00000306256 LRBAP50851 2863 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 FAM227AF5H4B4 570 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 HNRNPRO43390 633 aaKnown RBP19.27■□□□□ 0.68
RER1-201ENST00000306256 CHST10O43529 356 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 B4GALT2O60909 372 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 IL10P22301 178 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 CA7P43166 264 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 SLC26A5P58743 744 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 RGS1Q08116 209 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 PWP1Q13610 501 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 CSHL1Q14406 222 aa19.27■□□□□ 0.68
RER1-201ENST00000306256 SBSNQ6UWP8 590 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms