RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SLC10A7Q0GE19 358 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 IHHQ14623 411 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 TBCEQ15813 527 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 PTPRNQ16849 979 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 SUSD1Q6UWL2 747 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 CELF5Q8N6W0 485 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 OTULINQ96BN8 352 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 FOPNLQ96NB1 174 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 COL21A1Q96P44 957 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 NIFKQ9BYG3 293 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 NXF2Q9GZY0 626 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 CLEC4MQ9H2X3 399 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 B3GAT2Q9NPZ5 323 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 IFT46Q9NQC8 304 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 PRMT7Q9NVM4 692 aaPredicted RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 ENOPH1Q9UHY7 261 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 CBX5P45973 191 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 RPS5P46782 204 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 TIAL1Q01085 375 aaKnown RBP eCLIP13.92□□□□□ -0.18
CDT1-201ENST00000301019 GRIK2Q13002 908 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 KEAP1Q14145 624 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 TMEM132BQ14DG7 1078 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 LRFN4Q6PJG9 635 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 IL20RBQ6UXL0 311 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 AGMOQ6ZNB7 445 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 TRILQ7L0X0 811 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 SHFQ7M4L6 423 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 RDH10Q8IZV5 341 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 COQ8AQ8NI60 647 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 FUBP1Q96AE4 644 aaKnown RBP13.92□□□□□ -0.18
CDT1-201ENST00000301019 C12orf57Q99622 126 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 MED28Q9H204 178 aa13.92□□□□□ -0.18
CDT1-201ENST00000301019 ARID1AO14497 2285 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 AOC2O75106 756 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 RFPL3O75679 317 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 SCELO95171 688 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 RETP07949 1114 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 TACR1P25103 407 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 GON4LQ3T8J9 2241 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 ARID2Q68CP9 1835 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 OR4F3Q6IEY1 312 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 MOB2Q70IA6 237 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 BBS7Q8IWZ6 715 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 TTC9Q92623 222 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 MS4A3Q96HJ5 214 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 EGFL8Q99944 293 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 ZNF768Q9H5H4 540 aaKnown RBP13.91□□□□□ -0.18
CDT1-201ENST00000301019 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 GTF2IRD1Q9UHL9 959 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 CFAP20Q9Y6A4 193 aaKnown RBP13.91□□□□□ -0.18
CDT1-201ENST00000301019 EVPLQ92817 2033 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 PRRG1O14668 218 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 ARIH2O95376 493 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 SRP9P49458 86 aaKnown RBP13.91□□□□□ -0.18
CDT1-201ENST00000301019 ETV1P50549 477 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 BCL2L1Q07817 233 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 MBOAT1Q6ZNC8 495 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 PTCHD4Q6ZW05 846 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 GPR149Q86SP6 731 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 OR56A4Q8NGH8 313 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 RBPMSQ93062 196 aaKnown RBP13.91□□□□□ -0.18
CDT1-201ENST00000301019 LINGO1Q96FE5 620 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 BRINP2Q9C0B6 783 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 PPA2Q9H2U2 334 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 FAM8A1Q9UBU6 413 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 TMCC3Q9ULS5 477 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 TNPO3Q9Y5L0 923 aaKnown RBP13.91□□□□□ -0.18
CDT1-201ENST00000301019 TTC3P53804 2025 aa13.91□□□□□ -0.18
CDT1-201ENST00000301019 KPNA5O15131 536 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 LYRM1O43325 122 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 MPC2O95563 127 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CBX7O95931 251 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 RD3LP0DJH9 198 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 POU3F2P20265 443 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 FPR1P21462 350 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CPT1AP50416 773 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 GEMP55040 296 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 BNC1Q01954 994 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 GRM1Q13255 1194 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 TNK1Q13470 666 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 KLHL12Q53G59 568 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CIR1Q86X95 450 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 TCTE3Q8IZS6 198 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 DNAJA4Q8WW22 397 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 DPF3Q92784 378 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 SPNS1Q9H2V7 528 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 ASAH2Q9NR71 780 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 ZNF226Q9NYT6 803 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CBX4O00257 560 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 PI15O43692 258 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 PSMA1P25786 263 aaKnown RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 TARBP2Q15633 366 aaKnown RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 COQ5Q5HYK3 327 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 CNIH2Q6PI25 160 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 WDR53Q7Z5U6 358 aaPredicted RBP13.9□□□□□ -0.18
CDT1-201ENST00000301019 ZSWIM9Q86XI8 627 aa13.9□□□□□ -0.18
CDT1-201ENST00000301019 MEX3DQ86XN8 651 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms