RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ZNF77Q15935 545 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 AKAP14Q86UN6 197 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 PROSER1Q86XN7 944 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 TMEM126BQ8IUX1 230 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 LSMEM1Q8N8F7 131 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF548Q8NEK5 533 aaPredicted RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 BTN2A2Q8WVV5 523 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 LMLNQ96KR4 655 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 MRGPRX3Q96LB0 322 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 TOR3AQ9H497 397 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 RIBC2Q9H4K1 309 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CLMPQ9H6B4 373 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 NTN4Q9HB63 628 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 STOX2Q9P2F5 926 aaPredicted RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 TBC1D14Q9P2M4 693 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 PCDHB3Q9Y5E6 796 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 RFXAPO00287 272 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 RTCAO00442 366 aaKnown RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 SGTAO43765 313 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 SH3BP5O60239 455 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 RASAL1O95294 804 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 RAP2AP10114 183 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CDH1P12830 882 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 ALOX12P18054 663 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 PSMA3P25788 255 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 GTF2E2P29084 291 aaKnown RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 SOAT1P35610 550 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 PIGAP37287 484 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CSNK1DP48730 415 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 SEC13P55735 322 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CREMQ03060 361 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 KCNC4Q03721 635 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 ILF2Q12905 390 aaKnown RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 KIAA0040Q15053 153 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CYBRD1Q53TN4 286 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 TMEM179BQ7Z7N9 219 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 METTL3Q86U44 580 aaKnown RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 MICU2Q8IYU8 434 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 MMP21Q8N119 569 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 OR52J3Q8NH60 311 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 MED30Q96HR3 178 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 MAGED4Q96JG8 741 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CITED4Q96RK1 184 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 CPEB1Q9BZB8 566 aaKnown RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 C5AR2Q9P296 337 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 DEC1Q9P2X7 70 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 VPS29Q9UBQ0 182 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 PCYT1BQ9Y5K3 369 aaPredicted RBP9.74□□□□□ -0.85
FOXN4-201ENST00000299162 SNX8Q9Y5X2 465 aa9.74□□□□□ -0.85
FOXN4-201ENST00000299162 LINC01553A4QN01 128 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CLIC1O00299 241 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 YY2O15391 372 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 ASNA1O43681 348 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 KCNJ13O60928 360 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 FCGR1AP12314 374 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 PFKLP17858 780 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CD9P21926 228 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 ALDH9A1P49189 494 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 IL5RAQ01344 420 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 SELENBP1Q13228 472 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 SLC36A3Q495N2 470 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 ATAD3BQ5T9A4 648 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 PDE12Q6L8Q7 609 aaKnown RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 SPATC1Q76KD6 591 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 PLA2G15Q8NCC3 412 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 HUS1BQ8NHY5 278 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CLP1Q92989 425 aaKnown RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 USP7Q93009 1102 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 LYSMD1Q96S90 227 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 RMND5AQ9H871 391 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 C12orf4Q9NQ89 552 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 GIMAP4Q9NUV9 329 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 GBF1Q92538 1859 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CCRL2O00421 344 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 KRT8P05787 483 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 MAT2AP31153 395 aaKnown RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CRATP43155 626 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 MAP2K4P45985 399 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 TBPL1P62380 186 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 COQ5Q5HYK3 327 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 COLEC12Q5KU26 742 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 TMEM240Q5SV17 173 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 CCNYL2Q5T2Q4 361 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 ZNF551Q7Z340 670 aaPredicted RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 TRIM46Q7Z4K8 759 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 DPP10Q8N608 796 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 ISG20Q96AZ6 181 aaKnown RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 UHRF1Q96T88 793 aaPredicted RBP9.73□□□□□ -0.85
FOXN4-201ENST00000299162 RUBCNLQ9H714 662 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 NEUROG3Q9Y4Z2 214 aa9.73□□□□□ -0.85
FOXN4-201ENST00000299162 NUAK1O60285 661 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
FOXN4-201ENST00000299162 THRBP10828 461 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 C6P13671 934 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 ACPPP15309 386 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 AMD1P17707 334 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 CXCR2P25025 360 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 HTR1BP28222 390 aa9.72□□□□□ -0.85
FOXN4-201ENST00000299162 IMPA1P29218 277 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms