RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TAAR2Q9P1P5 351 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 MAPRE3Q9UPY8 281 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 CROCCQ5TZA2 2017 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 A0A1W2PR77 199 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 ANKDD1BA6NHY2 528 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 PCDH7O60245 1069 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 LRATO95237 230 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 ZCCHC18P0CG32 403 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 HNRNPFP52597 415 aaKnown RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 UGT8Q16880 541 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 RABL3Q5HYI8 236 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 SPATA24Q86W54 205 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 BHLHE22Q8NFJ8 381 aaPredicted RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 OR2L3Q8NG85 312 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.9□□□□□ -0.02
LSM6-201ENST00000296581 ABTB1Q969K4 478 aaPredicted RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 MS4A8Q9BY19 250 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 PCDHAC1Q9H158 963 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 KCNH6Q9H252 994 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 PRM3Q9NNZ6 103 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 SLC6A20Q9NP91 592 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 MRPS30Q9NP92 439 aaKnown RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 SERHLQ9NQF3 203 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 INIPQ9NRY2 104 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 TMEM184CQ9NVA4 438 aa14.9□□□□□ -0.02
LSM6-201ENST00000296581 GMPR2Q9P2T1 348 aaKnown RBP14.9□□□□□ -0.02
LSM6-201ENST00000296581 STK25O00506 426 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SEMA3DO95025 777 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 CCNDBP1O95273 360 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 CHRM5P08912 532 aaPredicted RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 ANPEPP15144 967 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 CD97P48960 835 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 BLKP51451 505 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SRSF11Q05519 484 aaKnown RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 LRRC74BQ6ZQY2 392 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 OR8J3Q8NGG0 315 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 PYDC1Q8WXC3 89 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 ANGPTL2Q9UKU9 493 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SNRNP200O75643 2136 aaKnown RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 EML5Q05BV3 1969 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 TRBV5-3A0A0A0MS03 114 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 TRBC2A0A5B9 178 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 FEZF1A0PJY2 475 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 K7ESF4 209 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 AKAP10O43572 662 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 WNT1P04628 370 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 NAT1P18440 290 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 HRH2P25021 359 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 KIR3DL1P43629 444 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 CXCL12P48061 93 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 BNIP2Q12982 314 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 ZNF542PQ5EBM4 170 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 LRIF1Q5T3J3 769 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 DEPDC1Q5TB30 811 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 KHDRBS2Q5VWX1 349 aaKnown RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 CAMKMTQ7Z624 323 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SLC9B2Q86UD5 537 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 GPR180Q86V85 440 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 IQCHQ86VS3 1027 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 ADGRF3Q8IZF5 1079 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 OR4E2Q8NGC2 313 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 OR8J2Q8NGG1 315 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 JPH3Q8WXH2 748 aaPredicted RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 GFM2Q969S9 779 aaKnown RBP14.89□□□□□ -0.03
LSM6-201ENST00000296581 PPM1MQ96MI6 270 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 IER2Q9BTL4 223 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SARGQ9BW04 601 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 TRIM8Q9BZR9 551 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 RMND5AQ9H871 391 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 POT1Q9NUX5 634 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 VAPAQ9P0L0 249 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 THEGQ9P2T0 379 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 INVSQ9Y283 1065 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 SIT1Q9Y3P8 196 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 CEP192Q8TEP8 1941 aa14.89□□□□□ -0.03
LSM6-201ENST00000296581 TRBV23OR9-2A0A075B6M9 112 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 A0A096LPI6 279 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 OR5K4A6NMS3 321 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 H3BNX3 289 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 SCAMP2O15127 329 aaKnown RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 ERN1O75460 977 aaKnown RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 KLHL18O94889 574 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 HOXB9P17482 250 aaPredicted RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 CMPK1P30085 196 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 GSK3BP49841 420 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 UBE2IP63279 158 aaKnown RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 LIPEQ05469 1076 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 ZNF763Q0D2J5 394 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 PRRT3Q5FWE3 981 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 MSRB3Q8IXL7 192 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 FBXL6Q8N531 539 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 DEFB119Q8N690 84 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 WDR48Q8TAF3 677 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 SNRNP27Q8WVK2 155 aaKnown RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 ITCHQ96J02 903 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 ARPC5LQ9BPX5 153 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 PAIP1Q9H074 479 aaKnown RBP14.88□□□□□ -0.03
LSM6-201ENST00000296581 SRMSQ9H3Y6 488 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 ALG2Q9H553 416 aa14.88□□□□□ -0.03
LSM6-201ENST00000296581 SLC25A37Q9NYZ2 338 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms