RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 LMNTD1Q8N9Z9 388 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 ZNF740Q8NDX6 193 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.17■□□□□ 0.53e-6■□□□□ 8.6
VBP1-201ENST00000286428 C16orf78Q8WTQ4 265 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 LRTOMTQ8WZ04 291 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 TSACCQ96A04 125 aaPredicted RBP18.17■□□□□ 0.5
VBP1-201ENST00000286428 RGMAQ96B86 450 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 PPCDCQ96CD2 204 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 NR1H4Q96RI1 486 aaPredicted RBP18.17■□□□□ 0.5
VBP1-201ENST00000286428 TRIM8Q9BZR9 551 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 SPNS1Q9H2V7 528 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 CD93Q9NPY3 652 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 CUEDC1Q9NWM3 386 aaPredicted RBP18.17■□□□□ 0.5
VBP1-201ENST00000286428 SPASTQ9UBP0 616 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 ICKQ9UPZ9 632 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 COLQQ9Y215 455 aaPredicted RBP18.17■□□□□ 0.5
VBP1-201ENST00000286428 GMEB1Q9Y692 573 aa18.17■□□□□ 0.5
VBP1-201ENST00000286428 CLIC1O00299 241 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 CAPN5O15484 640 aaPredicted RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 SCN2BO60939 215 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 WNT3P56703 355 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 OR4D2P58180 307 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 TRA2BP62995 288 aaKnown RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 YBX1P67809 324 aaKnown RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 KLC1Q07866 573 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 C2orf80Q0P641 193 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 MED21Q13503 144 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 Q6ZS52 159 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 MSRB3Q8IXL7 192 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 ADGRG5Q8IZF4 528 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 ANKFN1Q8N957 763 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 SRFBP1Q8NEF9 429 aaKnown RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 ZNF548Q8NEK5 533 aaPredicted RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 BIRC7Q96CA5 298 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 INPP5KQ9BT40 448 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 SARGQ9BW04 601 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 PCED1AQ9H1Q7 454 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 PIF1Q9H611 641 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 C6orf106Q9H6K1 298 aaPredicted RBP18.16■□□□□ 0.5
VBP1-201ENST00000286428 CA14Q9ULX7 337 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 VPS4AQ9UN37 437 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 NUMA1Q14980 2115 aa18.16■□□□□ 0.5
VBP1-201ENST00000286428 TCRBV5S2A0A599 114 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 IGHV4-34P06331 123 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 RETP07949 1114 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 LAMP1P11279 417 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 UQCRBP14927 111 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 HOXB9P17482 250 aaPredicted RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 AHRP35869 848 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PDE7AQ13946 482 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 ALG11Q2TAA5 492 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 FAM71E1Q6IPT2 247 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 VN1R5Q7Z5H4 357 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 NUDT13Q86X67 352 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 CALHM3Q86XJ0 350 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 KBTBD2Q8IY47 623 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 GJD3Q8N144 294 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 DTWD1Q8N5C7 304 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 FIG4Q92562 907 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 TMEM168Q9H0V1 697 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 XKR8Q9H6D3 395 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 RPF2Q9H7B2 306 aaKnown RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 MIEF1Q9NQG6 463 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 GMPR2Q9P2T1 348 aaKnown RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 RAB26Q9ULW5 256 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 CA5BQ9Y2D0 317 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 NEUROG3Q9Y4Z2 214 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 C5orf42Q9H799 3197 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 A0A1W2PPC4 97 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 CXCR6O00574 342 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PRICKLE3O43900 615 aaPredicted RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 CPSF4O95639 269 aaKnown RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 FURINP09958 794 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PIM1P11309 404 aaPredicted RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 NCK1P16333 377 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 GPX2P18283 190 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PSMB5P28074 263 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PTPN6P29350 595 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 STARD6P59095 220 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 TAS2R50P59544 299 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 CHRNB3Q05901 458 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 KIR2DS3Q14952 304 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 SFT2D3Q587I9 215 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 SLC30A9Q6PML9 568 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 TICAM1Q8IUC6 712 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 TRIM48Q8IWZ4 208 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 PACRGLQ8N7B6 248 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 ANKRD53Q8N9V6 530 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 OR2L3Q8NG85 312 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 FAM162AQ96A26 154 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 CENPNQ96H22 339 aaPredicted RBP18.15■□□□□ 0.5
VBP1-201ENST00000286428 BDH2Q9BUT1 245 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 GPR174Q9BXC1 333 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 SRMSQ9H3Y6 488 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 FBXL21Q9UKT6 434 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 AP1M2Q9Y6Q5 423 aa18.15■□□□□ 0.5
VBP1-201ENST00000286428 ATG2BQ96BY7 2078 aa18.14■□□□□ 0.49
VBP1-201ENST00000286428 FAM221BA6H8Z2 402 aa18.14■□□□□ 0.49
VBP1-201ENST00000286428 ISM1B1AKI9 464 aa18.14■□□□□ 0.49
VBP1-201ENST00000286428 SAP18O00422 153 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms