RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 RIMKLBQ9ULI2 386 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ASCC3Q8N3C0 2202 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MYO7AQ13402 2215 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 A0A1W2PRU2 124 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 A8MUI8 341 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TLR4O00206 839 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MPPED1O15442 326 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 DIRAS3O95661 229 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SPATA31C1P0DKV0 1188 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ATP1B2P14415 290 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TNFSF4P23510 183 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ROR2Q01974 943 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CHAF1BQ13112 559 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TRAM2Q15035 370 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 UGCGQ16739 394 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MYLK3Q32MK0 819 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PRSS55Q6UWB4 352 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TPRG1Q6ZUI0 275 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LYSMD3Q7Z3D4 306 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SPATA6LQ8N4H0 392 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 WDSUB1Q8N9V3 476 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GRHL3Q8TE85 626 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GCDHQ92947 438 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 RHBDF1Q96CC6 855 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TMEM41AQ96HV5 264 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 COL21A1Q96P44 957 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 OR52B2Q96RD2 323 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LPAR4Q99677 370 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PTPN18Q99952 460 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 FAM86C1Q9NVL1 165 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF175Q9Y473 711 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MRPL42Q9Y6G3 142 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NBASA2RRP1 2371 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TRBV23OR9-2A0A075B6M9 112 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 PSMD9O00233 223 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ANKRD28O15084 1053 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 IFNGR1P15260 489 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZNF8P17098 575 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 DDCP20711 480 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 POLR2HP52434 150 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TAS2R40P59535 323 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 S100A10P60903 97 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 POU6F2P78424 691 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TDGQ13569 410 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SEMA3AQ14563 771 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GPR107Q5VW38 600 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TMEM198Q66K66 360 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GTF2IRD2BQ6EKJ0 949 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 AGTRAPQ6RW13 159 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GK5Q6ZS86 529 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KIAA0907Q7Z7F0 614 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GTF2IRD2Q86UP8 949 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LGI4Q8N135 537 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 AP1S3Q96PC3 154 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NUDT15Q9NV35 164 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GPR34Q9UPC5 381 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LTBP3Q9NS15 1303 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SVILO95425 2214 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 TRBC2A0A5B9 178 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MAP2K7O14733 419 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MID1O15344 667 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 KLRC4O43908 158 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ZMPSTE24O75844 475 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LATS1O95835 1130 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NPPAP01160 153 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 THEGLP0DJG4 465 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CDH1P12830 882 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 BDKRB1P46663 353 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ARSFP54793 590 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 UBE2NP61088 152 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 GRM7Q14831 915 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 LCTLQ6UWM7 567 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ERN2Q76MJ5 926 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 SSX6Q7RTT6 188 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 NIPA2Q8N8Q9 360 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 HOXB13Q92826 284 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ORAI3Q9BRQ5 295 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 EBPLQ9BY08 206 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 POLR2J2Q9GZM3 115 aaKnown RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 DENND2DQ9H6A0 471 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CDH20Q9HBT6 801 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 ABCB9Q9NP78 766 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 MKS1Q9NXB0 559 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 EGFL7Q9UHF1 273 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 U3KQV3 271 aa3.95□□□□□ -1.78
SCN3A-201ENST00000283254 CACNA1HO95180 2353 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TRIM64BA6NI03 449 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 EIF1AYO14602 144 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR2B3O76000 313 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR4F21O95013 312 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 P04436 131 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR4Q2P0C623 313 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PGCP20142 388 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 EIF1AXP47813 144 aaKnown RBP3.94□□□□□ -1.78
SCN3A-201ENST00000283254 PLEKHG6Q3KR16 790 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 ABHD17BQ5VST6 288 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 OR2T5Q6IEZ7 315 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 AMIGO2Q86SJ2 522 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 NPAS3Q8IXF0 933 aa3.94□□□□□ -1.78
SCN3A-201ENST00000283254 TRAM1L1Q8N609 369 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms