RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 CHIT1Q13231 466 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 OR56A1Q8NGH5 318 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 OR6N1Q8NGY5 312 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 AKT1S1Q96B36 256 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 MARK4Q96L34 752 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 SNX27Q96L92 541 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 C11orf49Q9H6J7 331 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ARHGAP20Q9P2F6 1191 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 CLEC3BP05452 202 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 RYKP34925 604 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 POLR2HP52434 150 aaKnown RBP12.9□□□□□ -0.34
PRDM16-201ENST00000270722 IL22RA1Q8N6P7 574 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 OR2T34Q8NGX1 318 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 OR2T3Q8NH03 318 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 SLC7A11Q9UPY5 501 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 MAP4K5Q9Y4K4 846 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ATP6AP2A0A1C7CYW4 349 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 ITGA5P08648 1049 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 RAB8AP61006 207 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 IDO2Q6ZQW0 420 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 MOAP1Q96BY2 351 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 KLHL15Q96M94 604 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 PADI3Q9ULW8 664 aa12.9□□□□□ -0.35
PRDM16-201ENST00000270722 DAPL1A0PJW8 107 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF891A8MT65 544 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 OXTRP30559 389 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF844Q08AG5 666 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ESCO2Q56NI9 601 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 KIAA0895Q8NCT3 520 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PROKR2Q8NFJ6 384 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 SMPDL3AQ92484 453 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 NKD1Q969G9 470 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 CGREF1Q99674 301 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 IPPKQ9H8X2 491 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 NCANO14594 1321 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 A0A1W2PQH9 124 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PTPRMP28827 1452 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 RANP62826 216 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 KCNJ2P63252 427 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TMEM220Q6QAJ8 160 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 SLC22A16Q86VW1 577 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PRKAB1Q9Y478 270 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TIGD3Q6B0B8 471 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF101Q8IZC7 436 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ZNF570Q96NI8 536 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 CLDND1Q9NY35 253 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TAS2R14Q9NYV8 317 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 BRCC3P46736 316 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 MVKQ03426 396 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ELOCQ15369 112 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 Q3ZCU0 254 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 USP30Q70CQ3 517 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PMEPA1Q969W9 287 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TTYH3Q9C0H2 523 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 BRF2Q9HAW0 419 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 A6NCN8 305 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PAK4O96013 591 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 MAD2L1BPQ15013 274 aaPredicted RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 OR5L2Q8NGL0 311 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 CNOT6Q9ULM6 557 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 DOPEY2Q9Y3R5 2298 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 C20orf202A1L168 122 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 KCNU1A8MYU2 1149 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 APOBEC3HQ6NTF7 200 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 RELL1Q8IUW5 271 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 OR4C5Q8NGB2 326 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 SPOCK2Q92563 424 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 FOXJ1Q92949 421 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 HNRNPABQ99729 332 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 AGLP35573 1532 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 GLTPD2A6NH11 291 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ADAM12O43184 909 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 SLC7A4O43246 635 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 RAD51DO75771 328 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 PFKLP17858 780 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 HSD11B2P80365 405 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 MALLQ13021 153 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ZCCHC23Q6ZST2 131 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 B3GNT4Q9C0J1 378 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 CARS2Q9HA77 564 aaKnown RBP12.89□□□□□ -0.35
PRDM16-201ENST00000270722 FBRSQ9HAH7 460 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TRPV4Q9HBA0 871 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 XPNPEP1Q9NQW7 623 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 TMEM248Q9NWD8 314 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
PRDM16-201ENST00000270722 ALDOAP04075 364 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 PRPS1L1P21108 318 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 RPS15P62841 145 aaKnown RBP12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SPIN3Q5JUX0 258 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 LRRC66Q68CR7 880 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 GSTCDQ8NEC7 633 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 OR4Q3Q8NH05 313 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 ZCCHC10Q8TBK6 192 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 SLC30A2Q9BRI3 323 aa12.88□□□□□ -0.35
PRDM16-201ENST00000270722 BORCS7-ASMTA0A0B4J1R7 106 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms