RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 A3GALT2U3KPV4 340 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 FRMPD3Q5JV73 1810 aa26.48■■□□□ 1.83
CBX4-201ENST00000269397 SCN8AQ9UQD0 1980 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 LINC00854A0A1B0GVQ3 168 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 ETFAP13804 333 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 CCND3P30281 292 aaPredicted RBP26.47■■□□□ 1.83
CBX4-201ENST00000269397 BCL7AQ4VC05 210 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 OR8H2Q8N162 312 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 TSEN34Q9BSV6 310 aaKnown RBP26.47■■□□□ 1.83
CBX4-201ENST00000269397 KLF16Q9BXK1 252 aaPredicted RBP26.47■■□□□ 1.83
CBX4-201ENST00000269397 CFAP20Q9Y6A4 193 aaKnown RBP26.47■■□□□ 1.83
CBX4-201ENST00000269397 PRAMEF25A6NGN4 478 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 LOC110117498-PIK3R3F6TDL0 507 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 SEPT4O43236 478 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 KRT8P05787 483 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 CBSLP0DN79 551 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 JUPP14923 745 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 CBSP35520 551 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 PFN3P60673 137 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 FOXJ1Q92949 421 aa26.47■■□□□ 1.83
CBX4-201ENST00000269397 ZW10O43264 779 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 MFN2O95140 757 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 APOA1P02647 267 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 GABRB1P18505 474 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 DEFA1P59665 94 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 DEFA3P59666 94 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 SELENOWP63302 87 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 CPTPQ5TA50 214 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 AGAP6Q5VW22 663 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 MFSD14CQ5VZR4 134 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 AGAP4Q96P64 663 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 NDEL1Q9GZM8 345 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 PDZK1P1A8MUH7 402 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 E7EQ34 232 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 OR2B6P58173 313 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 THOC7Q6I9Y2 204 aaKnown RBP26.46■■□□□ 1.83
CBX4-201ENST00000269397 C1orf52Q8N6N3 182 aaKnown RBP26.46■■□□□ 1.83
CBX4-201ENST00000269397 CEP19Q96LK0 163 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 NEDD4LQ96PU5 975 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 YME1L1Q96TA2 773 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 MOV10Q9HCE1 1003 aaKnown RBP26.46■■□□□ 1.83
CBX4-201ENST00000269397 CLEC4EQ9ULY5 219 aa26.46■■□□□ 1.83
CBX4-201ENST00000269397 C1orf226A1L170 272 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 TAF12Q16514 161 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 MLIPQ5VWP3 458 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 CPA6Q8N4T0 437 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 OR4K1Q8NGD4 311 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 TCF25Q9BQ70 676 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 N6AMT1Q9Y5N5 214 aa26.45■■□□□ 1.83
CBX4-201ENST00000269397 PCDH17O14917 1159 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 SCAMP2O15127 329 aaKnown RBP26.45■■□□□ 1.82
CBX4-201ENST00000269397 ADAMDEC1O15204 470 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 IDH3BO43837 385 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 PIK3CBP42338 1070 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 LIMK1P53667 647 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 CSTF3Q12996 717 aaKnown RBP26.45■■□□□ 1.82
CBX4-201ENST00000269397 GANABQ14697 944 aaKnown RBP26.45■■□□□ 1.82
CBX4-201ENST00000269397 TRAF7Q6Q0C0 670 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 NRARPQ7Z6K4 114 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 C11orf65Q8NCR3 313 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 MGLLQ99685 303 aa26.45■■□□□ 1.82
CBX4-201ENST00000269397 TMEM121BQ9BXQ6 578 aaPredicted RBP26.45■■□□□ 1.82
CBX4-201ENST00000269397 DDX28Q9NUL7 540 aaKnown RBP26.45■■□□□ 1.82
CBX4-201ENST00000269397 RGS5O15539 181 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 SOX6P35712 828 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 FBXO43Q4G163 708 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 BBS7Q8IWZ6 715 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 OR4A15Q8NGL6 344 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 EXOSC4Q9NPD3 245 aaKnown RBP26.44■■□□□ 1.82
CBX4-201ENST00000269397 GPATCH2Q9NW75 528 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 RHCGQ9UBD6 479 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 H3BM21 787 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 GBAP04062 536 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 ANXA4P09525 319 aaPredicted RBP26.44■■□□□ 1.82
CBX4-201ENST00000269397 SLC15A1P46059 708 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 DMPKQ09013 629 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 LRRC26Q2I0M4 334 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 CCDC190Q86UF4 302 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 CACTIN-AS1Q8N1I8 211 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 MED8Q96G25 268 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 RAD9AQ99638 391 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 MKLN1Q9UL63 735 aa26.44■■□□□ 1.82
CBX4-201ENST00000269397 H3BQ06 376 aaPredicted RBP26.43■■□□□ 1.82
CBX4-201ENST00000269397 C8GP07360 202 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 OR56A5P0C7T3 313 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 PTPN2P17706 415 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 DOC2AQ14183 400 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 MICAQ29983 383 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 ZMAT1Q5H9K5 638 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 DGKKQ5KSL6 1271 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 ATAD3CQ5T2N8 411 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 NPAS3Q8IXF0 933 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 UPF1Q92900 1129 aaKnown RBP eCLIP26.43■■□□□ 1.827e-8■□□□□ 10.9
CBX4-201ENST00000269397 FCRL1Q96LA6 429 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 DMRTB1Q96MA1 342 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 CASD1Q96PB1 797 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 ACSL6Q9UKU0 697 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 TBC1D24Q9ULP9 559 aa26.43■■□□□ 1.82
CBX4-201ENST00000269397 RUVBL1Q9Y265 456 aaKnown RBP26.43■■□□□ 1.82
CBX4-201ENST00000269397 POFUT2Q9Y2G5 429 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms