RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 ARID1BQ8NFD5 2236 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 A0A1W2PRB8 838 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 A0A1W2PRU2 124 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 IRGMA1A4Y4 181 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 EBLN1P0CF75 366 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ZNF865P0CJ78 1059 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 IL7P13232 177 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 GABRB3P28472 473 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 KDELR2P33947 212 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SLC9A3P48764 834 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 RING1Q06587 406 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 FAM214AQ32MH5 1076 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 C18orf21Q32NC0 220 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 KDELC1Q6UW63 502 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 FAM92BQ6ZTR7 304 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ZFAND4Q86XD8 727 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 YIPF4Q9BSR8 244 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SMURF1Q9HCE7 757 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 C1QTNF3-AMACRE9PGA6 284 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 FCER2P06734 321 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 LAG3P18627 525 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PTNP21246 168 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CCND3P30281 292 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CDK6Q00534 326 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SPATS1Q496A3 300 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PHYKPLQ8IUZ5 450 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CMTM8Q8IZV2 173 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 TMEM151AQ8N4L1 468 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 FAM98AQ8NCA5 519 aaKnown RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CHPT1Q8WUD6 406 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ALPK1Q96QP1 1244 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 AIF1LQ9BQI0 150 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 HTATIP2Q9BUP3 242 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SLC7A5P2Q9GIP4 190 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 RACGAP1Q9H0H5 632 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 THG1LQ9NWX6 298 aaKnown RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 OSER1Q9NX31 292 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 TBC1D24Q9ULP9 559 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 NCKAP1Q9Y2A7 1128 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 DLGAP1O14490 977 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ACOT8O14734 319 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 AXIN1O15169 862 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PDPK1O15530 556 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 BCKDHAP12694 445 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 GGT1P19440 569 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ARL4DP49703 201 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 EMX1Q04741 257 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 GALNT1Q10472 559 aaPredicted RBP11.18□□□□□ -0.62
VPS33A-201ENST00000267199 RPA4Q13156 261 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 NHSL2Q5HYW2 709 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 SNAP47Q5SQN1 464 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PLPP4Q5VZY2 271 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PPP2R2DQ66LE6 453 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ARL9Q6T311 187 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 MBOAT1Q6ZNC8 495 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 GOLM1Q8NBJ4 401 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 L3HYPDHQ96EM0 354 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 CD244Q9BZW8 370 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 PHF11Q9UIL8 331 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 ACTL7AQ9Y615 435 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 IRAK3Q9Y616 596 aa11.18□□□□□ -0.62
VPS33A-201ENST00000267199 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 HCN1O60741 890 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 NUDT14O95848 222 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CRHBPP24387 322 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CTNNB1P35222 781 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 DPP6P42658 865 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 GABARAPL2P60520 117 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 CBX2Q14781 532 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 SMN1Q16637 294 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 DPY19L3Q6ZPD9 716 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 COMMD2Q86X83 199 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 OR8D1Q8WZ84 308 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 SLC9A6Q92581 669 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 ERMAPQ96PL5 475 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 FEVQ99581 238 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 SLC29A3Q9BZD2 475 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 RSPH9Q9H1X1 276 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 MMP28Q9H239 520 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 INTS6Q9UL03 887 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 SCN9AQ15858 1988 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 TLL1O43897 1013 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 NUAK1O60285 661 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 UPK1BO75841 260 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 IFNA7P01567 189 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 S100A6P06703 90 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 C8AP07357 584 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 ALDOCP09972 364 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 DCKP27707 260 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 VMACQ2NL98 169 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 RFTN2Q52LD8 501 aaPredicted RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 LRRC66Q68CR7 880 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 LARP4Q71RC2 724 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 LINGO2Q7L985 606 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 ADAMTS15Q8TE58 950 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
VPS33A-201ENST00000267199 KCNN2Q9H2S1 579 aa11.17□□□□□ -0.62
VPS33A-201ENST00000267199 VAPAQ9P0L0 249 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms