RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 STX3Q13277 289 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CUL3Q13618 768 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 MAP7Q14244 749 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CPSF6Q16630 551 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 DEPDC1Q5TB30 811 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 ZNF385CQ66K41 422 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 ATG16L1Q676U5 607 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 RHBDD2Q6NTF9 364 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 PWWP2BQ6NUJ5 590 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 MED25Q71SY5 747 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 TRIM46Q7Z4K8 759 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 ADCK2Q7Z695 626 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CUZD1Q86UP6 607 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 MARCH9Q86YJ5 346 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CLYBLQ8N0X4 340 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CSNK1A1LQ8N752 337 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 HUS1BQ8NHY5 278 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 METTL6Q8TCB7 284 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 RERGQ96A58 199 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 C11orf24Q96F05 449 aaPredicted RBP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 METTL2AQ96IZ6 378 aaKnown RBP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 MS4A8Q9BY19 250 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 SIRT5Q9NXA8 310 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 SNX6Q9UNH7 406 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 SRPK3Q9UPE1 567 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 RUVBL1Q9Y265 456 aaKnown RBP13.6□□□□□ -0.23
SSBP1-201ENST00000265304 RAP2CQ9Y3L5 183 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 B3GALT1Q9Y5Z6 326 aa13.6□□□□□ -0.23
SSBP1-201ENST00000265304 CROCCQ5TZA2 2017 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 WDR91A4D1P6 747 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 ANKDD1BA6NHY2 528 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 MANBAO00462 879 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 AZIN1O14977 448 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 SCELO95171 688 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 TIAF1O95411 115 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 DLGAP3O95886 979 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 KRT6AP02538 564 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 KRT6BP04259 564 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 SLC35G6P0C7Q6 338 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 PTX3P26022 381 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-201ENST00000265304 SLC1A6P48664 564 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 KRT6CP48668 564 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 FOXA1P55317 472 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 GABREP78334 506 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 FOXC1Q12948 553 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 RBBP7Q16576 425 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 DEFB110Q30KQ9 67 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 TMEM35AQ53FP2 167 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 C3orf38Q5JPI3 329 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 TMEM164Q5U3C3 297 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 KANK2Q63ZY3 851 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 ADNP2Q6IQ32 1131 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 DTX1Q86Y01 620 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 GPR135Q8IZ08 494 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 ZNF655Q8N720 491 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-201ENST00000265304 GBP7Q8N8V2 638 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-201ENST00000265304 SLC38A9Q8NBW4 561 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 PMEPA1Q969W9 287 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 CMTM7Q96FZ5 175 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 C10orf90Q96M02 699 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 MAGEB18Q96M61 343 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 C7orf26Q96N11 449 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 CCT7Q99832 543 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 TMEM121BQ9BXQ6 578 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-201ENST00000265304 ILKAPQ9H0C8 392 aaPredicted RBP13.59□□□□□ -0.23
SSBP1-201ENST00000265304 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 PISDQ9UG56 409 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 ZDHHC2Q9UIJ5 367 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 TRAF6Q9Y4K3 522 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 CCL27Q9Y4X3 112 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 SCN2AQ99250 2005 aa13.59□□□□□ -0.23
SSBP1-201ENST00000265304 HYKKA2RU49 373 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF749O43361 778 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 ULK1O75385 1050 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 SEMA3DO95025 777 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 TNFSF15O95150 251 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 PRPH2P23942 346 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 TSFMP43897 325 aaKnown RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 FOXM1Q08050 763 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 RGS1Q08116 209 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 CYP4F3Q08477 520 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 CSTF3Q12996 717 aaKnown RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 RBBP5Q15291 538 aaKnown RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 MUM1Q2TAK8 710 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 HKDC1Q2TB90 917 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 CDYL2Q8N8U2 506 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 PROKR1Q8TCW9 393 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 NXPE2Q96DL1 559 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 MS4A6EQ96DS6 147 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF578Q96N58 590 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 PAIP2Q9BPZ3 127 aaKnown RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 DPH2Q9BQC3 489 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 NLNQ9BYT8 704 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
SSBP1-201ENST00000265304 DNAJC15Q9Y5T4 150 aa13.58□□□□□ -0.24
SSBP1-201ENST00000265304 FREM2Q5SZK8 3169 aa13.57□□□□□ -0.24
SSBP1-201ENST00000265304 URADA6NGE7 173 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms