RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CDKL4Q5MAI5 379 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 ATG14Q6ZNE5 492 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 HDAC2Q92769 488 aaKnown RBP16.16■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF689Q96CS4 500 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-201ENST00000264555 HSFX1Q9UBD0 423 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 PCDHGA4Q9Y5G9 962 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SESN1Q9Y6P5 492 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 H7BY64 318 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 XKRYO14609 159 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SNAP29O95721 258 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 CLIC3O95833 236 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 BMPR1AP36894 532 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 C18orf21Q32NC0 220 aaPredicted RBP16.16■□□□□ 0.18
PHRF1-201ENST00000264555 EOGTQ5NDL2 527 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 MPP7Q5T2T1 576 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SETD7Q8WTS6 366 aaKnown RBP16.16■□□□□ 0.18
PHRF1-201ENST00000264555 PRAP1Q96NZ9 151 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 HHLA1C9JL84 531 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 RPS17P08708 135 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF24P17028 368 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 METTL2BQ6P1Q9 378 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 PIANPQ8IYJ0 282 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 AQP11Q8NBQ7 271 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 MUS81Q96NY9 551 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 IFT27Q9BW83 186 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 ITPAQ9BY32 194 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 FARSBQ9NSD9 589 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 HCN4Q9Y3Q4 1203 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 TOR1BO14657 336 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 ARCN1P48444 511 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 TBPL1P62380 186 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 MYBPC1Q00872 1141 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 RBBP4Q09028 425 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 AKAP14Q86UN6 197 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 PIK3R3Q92569 461 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 KAT2AQ92830 837 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 IL4I1Q96RQ9 567 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 CAPN3P20807 821 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 HTR6P50406 440 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 RAB15P59190 212 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 FADDQ13158 208 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 IL18Q14116 193 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 PTGES3Q15185 160 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 SMARCD3Q6STE5 483 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 SFXN1Q9H9B4 322 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 NME4O00746 187 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 RAB8AP61006 207 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 KCNC4Q03721 635 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 TMCO2Q7Z6W1 182 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 CPXM2Q8N436 756 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 SMARCD2Q92925 531 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 UTP4Q969X6 686 aaKnown RBP16.15■□□□□ 0.18
PHRF1-201ENST00000264555 CLSTN3Q9BQT9 956 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 GSDMCQ9BYG8 508 aa16.15■□□□□ 0.18
PHRF1-201ENST00000264555 KLHL33A6NCF5 533 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 PRAMEF12O95522 483 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 KDELR2P33947 212 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 SEMA3BQ13214 749 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 SYT16Q17RD7 645 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 MANEALQ5VSG8 457 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 MSANTD1Q6ZTZ1 278 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 CHST14Q8NCH0 376 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 ACVR1CQ8NER5 493 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 CAPSLQ8WWF8 208 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 METTL21AQ8WXB1 218 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 OR5P2Q8WZ92 322 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 RHBDF1Q96CC6 855 aa16.14■□□□□ 0.18
PHRF1-201ENST00000264555 TIMP1P01033 207 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 RPS21P63220 83 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 PCDH1Q08174 1060 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 LETMD1Q6P1Q0 360 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ADGRD2Q7Z7M1 963 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 KLHL6Q8WZ60 621 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MYRFLQ96LU7 910 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 GPRC5BQ9NZH0 403 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 NPIPB15A6NHN6 443 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 CCDC85CA6NKD9 419 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ATXN1LP0C7T5 689 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ATF6P18850 670 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MAGP20916 626 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MATN1P21941 496 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MS4A2Q01362 244 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 CRTC2Q53ET0 693 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 PLET1Q6UQ28 207 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 HTR3DQ70Z44 454 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MAGIXQ9H6Y5 334 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 GPN3Q9UHW5 284 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 SMSP52788 366 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 SCN1BQ07699 218 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 KCNAB2Q13303 367 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 PRR23CQ6ZRP0 262 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 CLIP4Q8N3C7 705 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MZB1Q8WU39 189 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 HPS1Q92902 700 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 C12orf43Q96C57 262 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 SGIP1Q9BQI5 828 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 IKZF2Q9UKS7 526 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms