RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SLC2A13Q96QE2 648 aa15.74■□□□□ 0.11
GPC1-201ENST00000264039 C17orf62Q9BQA9 187 aa15.74■□□□□ 0.11
GPC1-201ENST00000264039 C11orf84Q9BUA3 381 aaPredicted RBP15.74■□□□□ 0.11
GPC1-201ENST00000264039 SORBS1Q9BX66 1292 aaKnown RBP15.74■□□□□ 0.11
GPC1-201ENST00000264039 RLIMQ9NVW2 624 aa15.74■□□□□ 0.11
GPC1-201ENST00000264039 SLC13A4Q9UKG4 626 aa15.74■□□□□ 0.11
GPC1-201ENST00000264039 GJD2Q9UKL4 321 aa15.74■□□□□ 0.11
GPC1-201ENST00000264039 ZBTB42B2RXF5 422 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 H3BQ06 376 aaPredicted RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 SLC30A4O14863 429 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 APOC3P02656 99 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 RPS17P08708 135 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 ITGAMP11215 1152 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CD6P30203 668 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CXCR4P61073 352 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CDONQ4KMG0 1287 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 ATAT1Q5SQI0 421 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 C11orf65Q8NCR3 313 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 OR4K1Q8NGD4 311 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 RHBDF1Q96CC6 855 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 ZNF639Q9UID6 485 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 TBC1D24Q9ULP9 559 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CLCA2Q9UQC9 943 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 YARS2Q9Y2Z4 477 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 XIRP1Q702N8 1843 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 B4DXG7 233 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 LDB2O43679 373 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CLDN9O95484 217 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 POLR2CP19387 275 aaPredicted RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 ACLYP53396 1101 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 MAZP56270 477 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 BICRALQ6AI39 1079 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 SUSD1Q6UWL2 747 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 TMIGD1Q6UXZ0 262 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 DPP10Q8N608 796 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 CELF5Q8N6W0 485 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 AGBL3Q8NEM8 1001 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 COQ8AQ8NI60 647 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 IMP4Q96G21 291 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 CRELD1Q96HD1 420 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 QRFPRQ96P65 431 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 TM9SF2Q99805 663 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 H2AFY2Q9P0M6 372 aaPredicted RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 PSORS1C1Q9UIG5 152 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 ZNF225Q9UK10 706 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 AP3M1Q9Y2T2 418 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 GPX5O75715 221 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 RETP07949 1114 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 IL32P24001 234 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 TGFBR2P37173 567 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 IRAK1BP1Q5VVH5 260 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 SNX20Q7Z614 316 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 OR4A15Q8NGL6 344 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 KAT2AQ92830 837 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 ZNF419Q96HQ0 510 aaPredicted RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 PAWRQ96IZ0 340 aaKnown RBP15.73■□□□□ 0.11
GPC1-201ENST00000264039 MCMBPQ9BTE3 642 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 TRIM62Q9BVG3 475 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 ABCG5Q9H222 651 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 SIRT5Q9NXA8 310 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 PCDHGB2Q9Y5G2 931 aa15.73■□□□□ 0.11
GPC1-201ENST00000264039 F5H5T6 163 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 LYRM1O43325 122 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 IFNA16P05015 189 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 PLCZ1Q86YW0 608 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 PJA1Q8NG27 643 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 C12orf66Q96MD2 445 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 BRINP2Q9C0B6 783 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 MARCH2Q9P0N8 246 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 IGKV6D-21A0A0A0MT36 114 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 SAP18O00422 153 aaKnown RBP15.72■□□□□ 0.11
GPC1-201ENST00000264039 ANXA8P13928 327 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 POU3F3P20264 500 aaPredicted RBP15.72■□□□□ 0.11
GPC1-201ENST00000264039 FADDQ13158 208 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 GBX1Q14549 363 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 ATG9BQ674R7 924 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 CNIH2Q6PI25 160 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 C10orf111Q8N326 155 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 RBCK1Q9BYM8 510 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 HCN3Q9P1Z3 774 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 PCDHGA6Q9Y5G7 932 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 SCN1AP35498 2009 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 J3KTA2 159 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 CH25HO95992 272 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 IFNA7P01567 189 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 SERPIND1P05546 499 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 ODC1P11926 461 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 DRD5P21918 477 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 RPIAP49247 311 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 GPR50Q13585 617 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 TTLL9Q3SXZ7 439 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 CPTPQ5TA50 214 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 LINC00299Q6ZSB3 139 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 PAQR9Q6ZVX9 377 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 MEX3DQ86XN8 651 aaKnown RBP15.72■□□□□ 0.11
GPC1-201ENST00000264039 KIF18BQ86Y91 864 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 CHAC2Q8WUX2 184 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 GATAD2BQ8WXI9 593 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 KLHL6Q8WZ60 621 aa15.72■□□□□ 0.11
GPC1-201ENST00000264039 NUDT4Q9NZJ9 180 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms