RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 SPATA9Q9BWV2 254 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 SGPP1Q9BX95 441 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 WARS2Q9UGM6 360 aaKnown RBP18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 PIPSLA2A3N6 862 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 TGFB1P01137 390 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 FGBP02675 491 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 SLC6A11P48066 632 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 HBA1P69905 142 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 MC1RQ01726 317 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 AQP6Q13520 282 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 COX20Q5RI15 118 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 IER5LQ5T953 404 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 RAET1GQ6H3X3 334 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 FNDC8Q8TC99 324 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 NUS1Q96E22 293 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 OR51B5Q9H339 312 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 REEP1Q9H902 201 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 DMRT3Q9NQL9 472 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 ERVK-18Q9QC07 812 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 RAPGEFL1Q9UHV5 662 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 ATP6V1HQ9UI12 483 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 GMPPBQ9Y5P6 360 aa18.78■□□□□ 0.6
CDC42EP1-201ENST00000249014 KLHL18O94889 574 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 PRNPP04156 253 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 C1GALT1C1LP0DN25 315 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 C6P13671 934 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 PPIBP23284 216 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 CD6P30203 668 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 VIPR2P41587 438 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 TAP2Q03519 686 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF763Q0D2J5 394 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 C9orf64Q5T6V5 341 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 TSEN54Q7Z6J9 526 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 SFTPA1Q8IWL2 248 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 LAS2Q8IYD9 372 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 OR9A1PQ8NGU1 263 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 WDR48Q8TAF3 677 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 SP7Q8TDD2 431 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 WFIKKN2Q8TEU8 576 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 FAR1Q8WVX9 515 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF707Q96C28 371 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 REPS1Q96D71 796 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZFYVE19Q96K21 471 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 RHNO1Q9BSD3 238 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 REEP4Q9H6H4 257 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 KRT84Q9NSB2 600 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 ZNF282Q9UDV7 671 aaPredicted RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 NDRG4Q9ULP0 352 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 MAPRE3Q9UPY8 281 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 CORO2BQ9UQ03 480 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 SLC27A6Q9Y2P4 619 aa18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 MRPS23Q9Y3D9 190 aaKnown RBP18.77■□□□□ 0.6
CDC42EP1-201ENST00000249014 NUP210Q8TEM1 1887 aaPredicted RBP18.77■□□□□ 0.59
CDC42EP1-201ENST00000249014 SH3PXD2BA1X283 911 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 FOXE1O00358 373 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MAGEB3O15480 346 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 HOXC11O43248 304 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 SUV39H1O43463 412 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MAN1A2O60476 641 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MMP20O60882 483 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 BCL10O95999 233 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 HNRNPA1P09651 372 aaKnown RBP eCLIP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCGF2P35227 344 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 GPR1P46091 355 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 GJA8P48165 433 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MLLT10P55197 1068 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 FAHD1Q6P587 224 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 TRMT11Q7Z4G4 463 aaKnown RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 CCDC71Q8IV32 467 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 CELF5Q8N6W0 485 aaKnown RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ATG16L2Q8NAA4 619 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 CIDECQ96AQ7 238 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 BHLHE41Q9C0J9 482 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 KIF17Q9P2E2 1029 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 DYRK1BQ9Y463 629 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCYT1BQ9Y5K3 369 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MUC22E2RYF6 1773 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 OTOL1A6NHN0 477 aaPredicted RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZNF197O14709 1029 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 PAPLNO95428 1278 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ETFAP13804 333 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 JUNDP17535 347 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ITGB7P26010 798 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 CRATP43155 626 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 PNLIPRP1P54315 467 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 SLC35A2P78381 396 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 NFE2L1Q14494 772 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 SPCS2Q15005 226 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 SMN1Q16637 294 aaKnown RBP18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 MPEG1Q2M385 716 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 CRTC3Q6UUV7 619 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ANGPTL8Q6UXH0 198 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ETFBKMTQ8IXQ9 262 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ZNF740Q8NDX6 193 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 UBE2FQ969M7 185 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 RAD9AQ99638 391 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 EFCAB11Q9BUY7 163 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 DUSP21Q9H596 190 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 ADPRHL2Q9NX46 363 aa18.76■□□□□ 0.59
CDC42EP1-201ENST00000249014 PCDHGB1Q9Y5G3 927 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms