RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 POMPQ9Y244 141 aa17.92■□□□□ 0.46
TNFSF9-201ENST00000245817 KLHL20Q9Y2M5 609 aa17.92■□□□□ 0.46
TNFSF9-201ENST00000245817 AP1M2Q9Y6Q5 423 aa17.92■□□□□ 0.46
TNFSF9-201ENST00000245817 SDC3O75056 442 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 STAMBPO95630 424 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 RPL3P39023 403 aaKnown RBP17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 MAZP56270 477 aaKnown RBP17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 CEACAM7Q14002 265 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 DEFB133Q30KQ1 61 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 TMEM35AQ53FP2 167 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 CCNYL2Q5T2Q4 361 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 PMS2CLQ68D20 193 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 ARL14Q8N4G2 192 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 MFSD9Q8NBP5 474 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 WDR48Q8TAF3 677 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 DNAJB14Q8TBM8 379 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 ITCHQ96J02 903 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 SARGQ9BW04 601 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 REXO4Q9GZR2 422 aaKnown RBP17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 ERVMER34-1Q9H9K5 563 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 ANKMY1Q9P2S6 941 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 FANCMQ8IYD8 2048 aa17.91■□□□□ 0.46
TNFSF9-201ENST00000245817 NDUFS4O43181 175 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PIAS2O75928 621 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 GBAP04062 536 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 TDGF1P13385 188 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 TCN1P20061 433 aaPredicted RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 FASLGP48023 281 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PPM1FP49593 454 aaPredicted RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 NUBP1P53384 320 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 C21orf58P58505 322 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 ACTR3P61158 418 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PLIN5Q00G26 463 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SLC5A12Q1EHB4 618 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SPESP1Q6UW49 350 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 MSANTD1Q6ZTZ1 278 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 R3HCC1LQ7Z5L2 792 aaKnown RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PAQR7Q86WK9 346 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 ZNF761Q86XN6 746 aaPredicted RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 ABCA7Q8IZY2 2146 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 VPS37AQ8NEZ2 397 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 ZUFSPQ96AP4 578 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SLC38A3Q99624 504 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 FBXO4Q9UKT5 387 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 OR5K3A6NET4 321 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PLPP1O14494 284 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SCAMP2O15127 329 aaKnown RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SORBS2O94875 1100 aaKnown RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 ARRB1P49407 418 aaPredicted RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 CYP4F3Q08477 520 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SRSF5Q13243 272 aaKnown RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SPATS1Q496A3 300 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 CPTPQ5TA50 214 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 FIGLAQ6QHK4 219 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 CEP68Q76N32 757 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 TRIM73Q86UV7 250 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 NUDT13Q86X67 352 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 SRFBP1Q8NEF9 429 aaKnown RBP17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 CREB3L4Q8TEY5 395 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 C16orf78Q8WTQ4 265 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 GTF2H4Q92759 462 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PRDM4Q9UKN5 801 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 PCDHGA4Q9Y5G9 962 aa17.9■□□□□ 0.46
TNFSF9-201ENST00000245817 GON4LQ3T8J9 2241 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 A0A0J9YY10 115 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 FXYD1O00168 92 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 CAPN5O15484 640 aaPredicted RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 TNFSF14O43557 240 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 ANP32DO95626 131 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 TYRP1P17643 537 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 MAGP20916 626 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 SLC6A2P23975 617 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 MAPK12P53778 367 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 STXBP1P61764 594 aaKnown RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 TGM3Q08188 693 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 C2orf80Q0P641 193 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 FLOT2Q14254 428 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 UGT8Q16880 541 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 OR4F3Q6IEY1 312 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 IKBIPQ70UQ0 350 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 SLC15A3Q8IY34 581 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 MAML2Q8IZL2 1156 aaPredicted RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 OR7A2PQ8NGA2 310 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 FLVCR1-AS1Q8TAF5 88 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 JADE3Q92613 823 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 CGREF1Q99674 301 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 SH3GL1Q99961 368 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 LRFN3Q9BTN0 628 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 TWSG1Q9GZX9 223 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 REEP4Q9H6H4 257 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 DCLRE1BQ9H816 532 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 UCK1Q9HA47 277 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 MYNNQ9NPC7 610 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 ATAD3AQ9NVI7 634 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 FAM120CQ9NX05 1096 aaKnown RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 SH3BP4Q9P0V3 963 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 SLAMF8Q9P0V8 285 aa17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.89■□□□□ 0.45
TNFSF9-201ENST00000245817 ADAM29Q9UKF5 820 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms