RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TEKT2Q9UIF3 430 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CDC14AQ9UNH5 594 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 A0A087WUV0 522 aaPredicted RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 A0A1W2PPV9 198 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 MAN1A2O60476 641 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 C1orf105O95561 183 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 ABHD2P08910 425 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 C8orf89P0DMQ9 161 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 CMPK1P30085 196 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 SSTR1P30872 391 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 SNRPNP63162 240 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TUBA3CQ13748 450 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PRTGQ2VWP7 1150 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 MINDY4Q4G0A6 757 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PTRHD1Q6GMV3 140 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 MRNIPQ6NTE8 343 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 TUBA3EQ6PEY2 450 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 ZC3H7AQ8IWR0 971 aaKnown RBP13.04□□□□□ -0.32
DDX39A-201ENST00000242776 RAB42Q8N4Z0 105 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 OR2A1Q8NGT9 310 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 RAD51AP1Q96B01 352 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 FAM136AQ96C01 138 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 SPOCK3Q9BQ16 436 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 RAB11FIP5Q9BXF6 653 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 KCNK13Q9HB14 408 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 NSMCE4AQ9NXX6 385 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 PPT2Q9UMR5 302 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 ZNF835Q9Y2P0 537 aa13.04□□□□□ -0.32
DDX39A-201ENST00000242776 HCFC1P51610 2035 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 LOC102723996A0A087X1L8 192 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 TCRBV9S1A1TA0A576 114 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 F8W8V4 182 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 PRPF4O43172 522 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■□□□ 14.1
DDX39A-201ENST00000242776 RIPK2O43353 540 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 AOAHP28039 575 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 EEF1DP29692 281 aaKnown RBP13.03□□□□□ -0.32
DDX39A-201ENST00000242776 SLC26A3P40879 764 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 GPX6P59796 221 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 OC90Q02509 493 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-201ENST00000242776 MGAT5Q09328 741 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 OR1C1Q15619 314 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 ACER2Q5QJU3 275 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 CYS1Q717R9 158 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 GALNTL5Q7Z4T8 443 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-201ENST00000242776 SDCCAG8Q86SQ7 713 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-201ENST00000242776 CRLF3Q8IUI8 442 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 MMP21Q8N119 569 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 MREGQ8N565 214 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 METTL21AQ8WXB1 218 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 IMMP1LQ96LU5 166 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 TUBB6Q9BUF5 446 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 MKKSQ9NPJ1 570 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-201ENST00000242776 ZFATQ9P243 1243 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 VPS9D1Q9Y2B5 631 aa13.03□□□□□ -0.32
DDX39A-201ENST00000242776 SPG11Q96JI7 2443 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 OR2A25A4D2G3 310 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 FAM90A27PA6NNH2 459 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 CD3EAPO15446 510 aaKnown RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 FOXS1O43638 330 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 VPS26AO75436 327 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 SLCO2B1O94956 709 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 ICAM2P13598 275 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 OGNP20774 298 aaKnown RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 ARNTP27540 789 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 CD96P40200 585 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 NAB1Q13506 487 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 KLHL38Q2WGJ6 581 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 RNF187Q5TA31 235 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 NEPROQ6NW34 567 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 TMEM205Q6UW68 189 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 Q6ZPB1 254 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 ADCK2Q7Z695 626 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 TMEM200AQ86VY9 491 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 DOLPP1Q86YN1 238 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 PLD3Q8IV08 490 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 FBF1Q8TES7 1133 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 THAP3Q8WTV1 239 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF354BQ96LW1 612 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 CCDC77Q9BR77 488 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 UTP23Q9BRU9 249 aaKnown RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 ENKD1Q9H0I2 346 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 MRPS30Q9NP92 439 aaKnown RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 MOCS1Q9NZB8 636 aa13.02□□□□□ -0.33
DDX39A-201ENST00000242776 MARCH4Q9P2E8 410 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-201ENST00000242776 NKX2-6A6NCS4 301 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 P2RX6O15547 441 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 ASNA1O43681 348 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 MLYCDO95822 493 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 CD1EP15812 388 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-201ENST00000242776 TTPAP49638 278 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 AP2B1P63010 937 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 ILF2Q12905 390 aaKnown RBP13.01□□□□□ -0.33
DDX39A-201ENST00000242776 MAPKAPK3Q16644 382 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 KRTCAP3Q53RY4 240 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 ZNF470Q6ECI4 717 aa13.01□□□□□ -0.33
DDX39A-201ENST00000242776 CPEB2Q7Z5Q1 589 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms