RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 ACSS1Q9NUB1 689 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 AP1G1O43747 822 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TPPPO94811 219 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 UCHL3P15374 230 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PSMA1P25786 263 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 NDST2P52849 883 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PTPRRQ15256 657 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZC3H12AQ5D1E8 599 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 UBE2NLQ5JXB2 153 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MFSD2AQ8NA29 543 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 OR10T2Q8NGX3 314 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TBC1D15Q8TC07 691 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TREX2Q9BQ50 279 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 GPR62Q9BZJ7 368 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF490Q9ULM2 529 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF451Q9Y4E5 1061 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MAP4K5Q9Y4K4 846 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RPP40O75818 363 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 IFNW1P05000 195 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MMP2P08253 660 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RPS2P15880 293 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 TMEM11P17152 192 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HK1P19367 917 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 VIPR1P32241 457 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RPL14P50914 215 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 S100A10P60903 97 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FKBP1AP62942 108 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 RPS21P63220 83 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 PPA1Q15181 289 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FAM110CQ1W6H9 321 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 DPCR1Q3MIW9 517 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 C3orf38Q5JPI3 329 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 CELF3Q5SZQ8 465 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 KIAA1614Q5VZ46 1190 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 BPIFB6Q8NFQ5 453 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF583Q96ND8 569 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ADAP2Q9NPF8 381 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 C1orf109Q9NX04 203 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MAGEL2Q9UJ55 1249 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 KCND3Q9UK17 655 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PCDHGA11Q9Y5H2 935 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RAI2Q9Y5P3 530 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MAP2K4P45985 399 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MAZP56270 477 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 CDK16Q00536 496 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SERINC3Q13530 473 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ARL6IP1Q15041 203 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 LPAL2Q16609 132 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PRRT3Q5FWE3 981 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SHC4Q6S5L8 630 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HOXB13Q92826 284 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 LPAR4Q99677 370 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 DGCR6LQ9BY27 220 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MS4A12Q9NXJ0 267 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SLC39A1Q9NY26 324 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 A0A1W2PQ09 198 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 CFHP08603 1231 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TNFSF8P32971 234 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 TMCO2Q7Z6W1 182 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 KIAA0895Q8NCT3 520 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ABHD11Q8NFV4 315 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 OR10H4Q8NGA5 316 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FCAMRQ8WWV6 532 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF347Q96SE7 839 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GPR174Q9BXC1 333 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PRPF19Q9UMS4 504 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 MEIOCA2RUB1 952 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 UBFD1O14562 309 aaKnown RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 GNB5O14775 395 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PEX11AO75192 247 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 IFNA7P01567 189 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ACP5P13686 325 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 PGCP20142 388 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ECT2LQ008S8 904 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RHDQ02161 417 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HES1Q14469 280 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 C15orf59Q2T9L4 293 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 TSHZ1Q6ZSZ6 1077 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 IQCKQ8N0W5 287 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 RSPRY1Q96DX4 576 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 LRTM1Q9HBL6 345 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 SPATA31A1Q5TZJ5 1347 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FAM240BA0A1B0GVZ2 78 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ELNP15502 786 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ATP4AP20648 1035 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 MAMLD1Q13495 774 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 CAPSQ13938 189 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HABP2Q14520 560 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
NEB-201ENST00000172853 KLHL36Q8N4N3 616 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 ZNF321PQ8N8H1 164 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 FAM210AQ96ND0 272 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 DAPL1A0PJW8 107 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GLTPD2A6NH11 291 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 UNCXA6NJT0 531 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 HAS3O00219 553 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 CLCN4P51793 760 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 GPR143P51810 404 aa3.35□□□□□ -1.87
NEB-201ENST00000172853 YBEYP58557 167 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms