RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Hbq1bQ3U0A6 142 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Foxj1Q61660 421 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pou4f2Q63934 411 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Inppl1Q6P549 1257 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cmtr2Q8BWQ4 767 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam155aQ8CCS2 467 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 GaleQ8R059 347 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Wdr74Q8VCG3 384 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr806Q8VFI2 313 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pcdhac1Q91Y10 964 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Asb8Q91ZT9 288 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tmprss6Q9DBI0 811 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm13078A2AGW8 474 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn2r103E9PWW0 856 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TtlP38585 377 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lrig1P70193 1091 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Alg10bQ3UGP8 474 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Grxcr1Q50H32 290 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rbm11Q80YT9 238 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Recql5Q8VID5 982 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gstt3Q99L20 241 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Chmp1b2Q9CQD4 199 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Q9DAR0 182 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Bag6Q9Z1R2 1154 aaKnown RBP11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Chd5A2A8L1 1946 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 FAM186AQ9D9R9 1790 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TomtA1Y9I9 258 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1306A2BFL7 312 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tcea1P10711 301 aaKnown RBP11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 S100a6P14069 89 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Kcnj5P48545 419 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CdonQ32MD9 1250 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rab26Q504M8 260 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Med22Q62276 200 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zzz3Q6KAQ7 910 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1231Q7TQZ8 313 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sall4Q8BX22 1067 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rdh1Q8CGV4 317 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Eipr1Q8K0G5 386 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Prokr2Q8K458 381 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Snx4Q91YJ2 450 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 B4galt3Q91YY2 395 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Far1Q922J9 515 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cntd1Q9D995 334 aa11.5□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ebf2O08792 575 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cdk5r2O35926 369 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 HcrtO55241 130 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dpy19l2P0CW70 773 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Bmp4P21275 408 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pou3f3P31361 497 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gstm5P48774 224 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Capn3Q64691 821 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr599Q8VG01 315 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Actr3Q99JY9 418 aaKnown RBP11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm3752A6NAT4 150 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fkbp7O54998 218 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Flt3lgP49772 232 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Adamts15P59384 950 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc2a6Q3UDF0 497 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arhgef9Q3UTH8 516 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Marveld2Q3UZP0 555 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Kcng4Q80XM3 506 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nlrp10Q8CCN1 673 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr398Q8VFY0 314 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TrehQ9JLT2 576 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cldn24D3YXJ9 220 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zbtb10E9Q8X5 861 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Smad6O35182 495 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dnajb3O35723 242 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Psmb10O35955 273 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 DctP29812 517 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mtmr11Q3V1L6 700 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ankrd37Q569N2 159 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Krtcap2Q5RL79 136 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Stk32aQ8BGW6 398 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gpr45Q9EQQ4 373 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Abcb10Q9JI39 715 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ppm1dQ9QZ67 598 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm21149A0A0G2JFY7 255 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Hsd17b10O08756 261 aaKnown RBP11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mtx2O88441 263 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm5571P01639 130 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sox9Q04887 507 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fezf1Q0VDQ9 475 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Obox3Q3UT54 335 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vdac3Q60931 283 aaKnown RBP11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1288Q7TQY0 312 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1085Q7TR64 313 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm9758Q80ZT2 255 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mrpl38Q8K2M0 380 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rab7bQ8VEA8 199 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Asb18Q8VHA6 467 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cdhr5Q8VHF2 831 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dsn1Q9CYC5 348 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PyurfQ9D1C3 112 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gsk3bQ9WV60 420 aa11.49□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm5460Q3UQ97 254 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zmpste24Q80W54 475 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc46a2Q8CA03 479 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cacnb2Q8CC27 655 aa11.48□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms