RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Slc6a4Q60857 630 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zfp180Q6NZI9 655 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Commd2Q8BXC6 199 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 ScaiQ8C8N2 606 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ubox5Q925F4 539 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sbk3P0C5K0 361 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Esr1P19785 599 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 HalP35492 657 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 FcamrQ2TB54 535 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Klhl42Q8BFQ9 493 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q91W34 466 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GlyatQ91XE0 296 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ist1Q9CX00 362 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q9D8N1 392 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Htra1Q9R118 480 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sema4fQ9Z123 777 aa9.99□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tnfrsf14A0A1W2P7D5 276 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm8050L7N2E3 205 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm6614M0QWR8 670 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MntO08789 591 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hcn1O88704 910 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gp6P0C191 313 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Stfa3P35173 103 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gdi1P50396 447 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gabarapl2P60521 117 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rnf43Q5NCP0 784 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1364Q5SZS9 314 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Grid2Q61625 1007 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cyp4b1Q64462 511 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Avl9Q80U56 649 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cpped1Q8BFS6 312 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Asrgl1Q8C0M9 326 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm4922Q8C0N0 497 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Aph1bQ8C7N7 257 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc5a11Q8K0E3 673 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zdhhc7Q91WU6 308 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sfxn1Q99JR1 322 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rbm18Q9CR83 190 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Fbxl20Q9CZV8 436 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Leng1Q9DB98 261 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm29276A0A087WNW5 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21117A0A087WPJ9 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm20820A0A087WPP3 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm20937A0A087WQA3 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21258A0A087WQC7 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm28102A0A087WQL3 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21095A0A087WR14 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm20792A0A087WRF5 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21865A0A087WRL2 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm28576A0A087WRP6 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm28490A0A087WRT9 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21294A0A087WS79 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm20824A0A087WS97 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm21996A0A087WSS9 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm28870A0A0A6YW38 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm29866A0A0A6YX04 222 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1145A2AVC7 325 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Obox5G3X9P6 291 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r21K7N6Y7 853 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Vmn2r20L7N2B1 853 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm3033M0QWI0 180 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gm3532M0QWL4 194 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sap18O55128 153 aaKnown RBP9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ntsr2P70310 416 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 SmsP97355 366 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tgtp2Q3T9E4 415 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Sec24aQ3U2P1 1090 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Q3UST5 385 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tgtp1Q62293 415 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tpgs2Q66JT5 296 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Zzz3Q6KAQ7 910 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Tas2r13Q7M720 305 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Wipi2Q80W47 445 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Prickle2Q80Y24 845 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Gpr61Q8C010 449 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Mill2Q8HWE5 355 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Hmgcs1Q8JZK9 520 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr1278Q8VF39 313 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr394Q8VGR5 310 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Slc8b1Q925Q3 585 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Get4Q9D1H7 327 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Rnase10Q9D5A9 208 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cyp2d22Q9JKY7 500 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Dnajb1Q9QYJ3 340 aaKnown RBP9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Irs2P81122 1321 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr741L7N1Y5 311 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Lrrc3P59034 257 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Neurog1P70660 244 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 G6pdxQ00612 515 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Itpripl2Q3UV16 535 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Six4Q61321 775 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Snap91Q61548 901 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Ostf1Q62422 215 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Olfr366Q7TRY4 309 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 AftphQ80WT5 931 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Acat3Q80X81 397 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Cst13Q80ZN5 141 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 MkxQ8BIA3 353 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 Glt28d2Q8BML3 165 aa9.98□□□□□ -0.81
Ccdc40-201ENSMUST00000035935 GatcQ8CBY0 155 aa9.98□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms