RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Ldoc1Q7TPY9 151 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Rims3Q80U57 307 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ldhal6bQ8BVP2 382 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Pex5lQ8C437 567 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 MINDY3Q9CV28 444 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Wwp2Q9DBH0 870 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sacm1lQ9EP69 587 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Tspan3Q9QY33 253 aa16.3■□□□□ 0.2
Ctcf-201ENSMUST00000005841 CroccQ8CJ40 2009 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Usp2O88623 613 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Hoxc5P32043 222 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sult2a2P50236 285 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ap2s1P62743 142 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Pitx1P70314 315 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 ItkQ03526 625 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ulk3Q3U3Q1 472 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Pin1rt1Q3ULQ2 159 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cdk15Q3V3A1 433 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Olfr598Q7TRR2 319 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Slc7a6Q8BGK6 515 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Rgs7bpQ8BQP9 257 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Abi3Q8BYZ1 367 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 C1raQ8CG16 707 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Mrps2Q924T2 291 aaKnown RBP16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Gipc2Q9Z2H7 314 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Scml2B1AVB3 969 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Man2b2O54782 1018 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Pde7aP70453 456 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Rars2Q3U186 578 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Bod1Q5SQY2 173 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cldn11Q60771 207 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 HiraQ61666 1015 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Dennd5aQ6PAL8 1287 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Olfr1415Q7TQS4 311 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cers6Q8C172 384 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ift80Q8K057 777 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Olfr1416Q8VGU4 312 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Olfr622Q8VGY7 317 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Barhl2Q8VIB5 384 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ube2fQ9CY34 185 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sema6cQ9WTM3 931 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 1700001O22RikA2APZ1 375 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Spata31E9QAF0 1014 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 P06324 132 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Pdx1P52946 284 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cyb5r4Q3TDX8 528 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cd47Q61735 303 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 PapolgQ6PCL9 739 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Tab1Q8CF89 502 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 McatQ8R3F5 381 aaKnown RBP16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Mzt2Q9CQ25 159 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sp2Q9D2H6 612 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Plag1Q9QYE0 499 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Decr2Q9WV68 292 aa16.29■□□□□ 0.2
Ctcf-201ENSMUST00000005841 TP20293 436 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 TfamP40630 243 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Fcho2Q3UQN2 809 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sqstm1Q64337 442 aaKnown RBP16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 PtprcapQ64697 197 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Galnt7Q80VA0 657 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Bpifb2Q8C1E1 462 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Dleu7Q8CHZ8 209 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 PpcsQ8VDG5 311 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Serpinb1aQ9D154 379 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 9230112D13RikQ9D260 137 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Scgb2b17S4R2V3 82 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 H2-D1P14427 368 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Vps26aP40336 327 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Mapkapk2P49138 386 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 CartptP56388 129 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cntn5P68500 1098 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 PrtgQ2EY15 1191 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Btg1-ps1Q3V0S2 161 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Btg1-ps2Q3V0X0 161 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Q5XFZ0 217 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Zadh2Q8BGC4 377 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Arhgap19Q8BRH3 494 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Acsl5Q8JZR0 683 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Igsf8Q8R366 611 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ogfrl1Q8VE52 464 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Sh3bp4Q921I6 962 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Them5Q9CQJ0 248 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Chaf1bQ9D0N7 572 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Zdhhc21Q9D270 265 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Ramp2Q9WUP0 189 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 AicdaQ9WVE0 198 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Gm4871D3Z0W7 314 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Vmn2r125D3Z3M1 369 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 LipiF6YQT7 476 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 HbaP01942 142 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cpne7Q0VE82 557 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 AbrQ5SSL4 859 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Slc15a3Q8BPX9 578 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Cmtr2Q8BWQ4 767 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Slc29a4Q8R139 528 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Vmn1r33Q8R2E0 305 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Plpp3Q99JY8 312 aa16.28■□□□□ 0.2
Ctcf-201ENSMUST00000005841 4933424G06RikA0A140LIP3 267 aa16.27■□□□□ 0.2
Ctcf-201ENSMUST00000005841 Slc6a2O55192 617 aa16.27■□□□□ 0.2
Ctcf-201ENSMUST00000005841 MatkP41242 505 aa16.27■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 23 ms