RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 H60cB1B213 197 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr592E9PYB3 312 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 AF366264G3X9P9 502 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm2888K7N746 267 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Slc22a2O70577 553 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Kcnj9P48543 393 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Mapkapk2P49138 386 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Flt3lgP49772 232 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Slc1a5P51912 553 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Stat6P52633 837 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rps14P62264 151 aaKnown RBP15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rps26P62855 115 aaKnown RBP15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Tspan12Q8BKT6 305 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm4922Q8C0N0 497 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Cadm1Q8R5M8 456 aaKnown RBP15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr315Q8VFG7 309 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr791Q8VGJ0 312 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr53Q8VGL8 312 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 St3gal4Q91Y74 333 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 SardhQ99LB7 919 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Fis1Q9CQ92 152 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Q9D4W2 315 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Q9D937 123 aaKnown RBP15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rad9aQ9Z0F6 389 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Upk1bQ9Z2C6 260 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Sult2a7A0A1B0GRF0 313 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Fam71f2B2RXB0 297 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm8334F7CD45 553 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Bard1O70445 765 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Ctla2aP12399 137 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Erp29P57759 262 aaKnown RBP15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Tsc22d1P62500 1077 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Il18r1Q61098 537 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 CilpQ66K08 1184 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Galnt2Q6PB93 570 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Adgre4Q91ZE5 689 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Adgrl4Q923X1 739 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 PrepQ9QUR6 710 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Fkbp9Q9Z247 570 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Htatip2Q9Z2G9 242 aa15.68■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm45861A0A1B0GRY3 1923 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm13089A2AGW7 455 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Lzts3A2AHG0 700 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 P01644 108 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 P01645 108 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 P01646 108 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 P01647 108 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Hoxd4P10628 250 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Padi2Q08642 673 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Cyp1b1Q64429 543 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Larp4bQ6A0A2 741 aaKnown RBP15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr1152Q7TR34 310 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm9758Q80ZT2 255 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Scn3bQ8BHK2 215 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Hmbox1Q8BJA3 419 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 MaobQ8BW75 520 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Tmem125Q8CHQ6 216 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Ndufs2Q91WD5 463 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gpr37l1Q99JG2 481 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Ovca2Q9D7E3 225 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 GraspQ9JJA9 392 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Ect2lA0A140LIP2 953 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 BC024063A0A1W2P7G7 749 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr1123A2AT85 323 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Esp18A8R0V1 91 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 BC049352E9Q2Z6 85 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm10324L7N208 604 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Xrra1Q3U3V8 786 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 MagixQ4KL35 324 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Hesx1Q61658 185 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Pwwp2aQ69Z61 730 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Prrg3Q6PAQ9 231 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Bhlhb9Q6PB60 539 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Reep1Q8BGH4 201 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Chst8Q8BQ86 417 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Pih1d2Q8CHR9 315 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr448Q8VES9 310 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gbgt1Q8VI38 347 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Q9D454 513 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Vmn1r65Q9EPS7 332 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Prokr1Q9JKL1 393 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 TrehQ9JLT2 576 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Spo11Q9WTK8 396 aa15.67■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm5565A0A0G2JGB2 317 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Gm12695A2AGB2 545 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Il1aP01582 270 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 HmgclP38060 325 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Alox12P39655 663 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Slc26a1P58735 704 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rack1P68040 317 aaKnown RBP15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Fut7Q11131 389 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Tmem253Q3UNB8 204 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Aldh16a1Q571I9 802 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Kpna1Q60960 538 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Bcap31Q61335 245 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Runx1t1Q61909 577 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr320Q7TRZ4 306 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Rmnd5aQ80YQ8 391 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Nudt4Q8R2U6 179 aa15.66■□□□□ 0.1
Trim28-201ENSMUST00000005705 Olfr846Q8VET8 312 aa15.66■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 23.9 ms