RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 PI15O43692 258 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ELK4P28324 431 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 KDELR2P33947 212 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 WASP42768 502 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ZNF385BQ569K4 471 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ZNF740Q8NDX6 193 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 PJA1Q8NG27 643 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 RAD51AP1Q96B01 352 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 CHFRQ96EP1 664 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 MBOAT4Q96T53 435 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 ING2Q9H160 280 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 LTB4R2Q9NPC1 389 aa20.69■□□□□ 0.9
CLN6-224ENST00000638076 TDRKHQ9Y2W6 561 aaKnown RBP20.69■□□□□ 0.9
CLN6-224ENST00000638076 REV3LO60673 3130 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 ATG2AQ2TAZ0 1938 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 DENND4AQ7Z401 1863 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 HS6ST1O60243 411 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 SLC5A2P31639 672 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 ESRRGP62508 458 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 CDK3Q00526 305 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 EPS8Q12929 822 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 PRAMEF14Q5SWL7 426 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 PRAMEF13Q5VWM6 474 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 TTC23Q5W5X9 447 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 LPCAT2Q7L5N7 544 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 GPR141Q7Z602 305 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 CHPFQ8IZ52 775 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 AMBRA1Q9C0C7 1298 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 IL1RAPQ9NPH3 570 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 RPS6KA6Q9UK32 745 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 ABCG2Q9UNQ0 655 aa20.68■□□□□ 0.9
CLN6-224ENST00000638076 MID1O15344 667 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 PIGAP37287 484 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 PBX2P40425 430 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 GAB1Q13480 694 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 SYNPOQ8N3V7 929 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 OR4A15Q8NGL6 344 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 WDR48Q8TAF3 677 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 PUM2Q8TB72 1066 aaKnown RBP eCLIP20.67■□□□□ 0.9
CLN6-224ENST00000638076 ZFP90Q8TF47 636 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 SETD7Q8WTS6 366 aaKnown RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 TFGQ92734 400 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 NPLQ9BXD5 320 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 REEP4Q9H6H4 257 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 TM7SF3Q9NS93 570 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 SIRT5Q9NXA8 310 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 VNN3Q9NY84 501 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 IFT80Q9P2H3 777 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 RNASET2O00584 256 aaKnown RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 PCDH8O95206 1070 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 NTRK1P04629 796 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 ABCB1P08183 1280 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 NUDT7P0C024 238 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 KELP23276 732 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 PCSK6P29122 969 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 CDK9P50750 372 aaKnown RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 TAS2R38P59533 333 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 RPA4Q13156 261 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 IER5LQ5T953 404 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 CHST15Q7LFX5 561 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 THAP5Q7Z6K1 395 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 LRRTM4Q86VH4 590 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 HIPK1Q86Z02 1210 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 YAF2Q8IY57 180 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 C8orf59Q8N0T1 100 aaPredicted RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 ZNF555Q8NEP9 628 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 CXorf40BQ96DE9 158 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 ACAT2Q9BWD1 397 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 ATP6V1HQ9UI12 483 aa20.67■□□□□ 0.9
CLN6-224ENST00000638076 CFAP20Q9Y6A4 193 aaKnown RBP20.67■□□□□ 0.9
CLN6-224ENST00000638076 MC1RQ01726 317 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 KCNAB2Q13303 367 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 WSCD2Q2TBF2 565 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 AGBL4Q5VU57 503 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 VTCN1Q7Z7D3 282 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 DCUN1D3Q8IWE4 304 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 OR4K1Q8NGD4 311 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 NRTNQ99748 197 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 BHLHE41Q9C0J9 482 aaPredicted RBP20.66■□□□□ 0.9
CLN6-224ENST00000638076 CHST8Q9H2A9 424 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 C3orf18Q9UK00 162 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 VPS4AQ9UN37 437 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 STON1Q9Y6Q2 735 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 B4GAT1O43505 415 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 PPIBP23284 216 aaKnown RBP20.66■□□□□ 0.9
CLN6-224ENST00000638076 HLCSP50747 726 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 RGNQ15493 299 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 ZBED5Q49AG3 693 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 LCTLQ6UWM7 567 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 CBLL1Q75N03 491 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 ALDH16A1Q8IZ83 802 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 ARL10Q8N8L6 244 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 ZNF282Q9UDV7 671 aaPredicted RBP20.66■□□□□ 0.9
CLN6-224ENST00000638076 CDH7Q9ULB5 785 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 CORO2BQ9UQ03 480 aa20.66■□□□□ 0.9
CLN6-224ENST00000638076 hCG_2039718K7EN88 272 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 SEMG1P04279 462 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 PIK3CBP42338 1070 aa20.65■□□□□ 0.9
CLN6-224ENST00000638076 CAMK2GQ13555 558 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms