RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 SEC61A2Q9H9S3 476 aa18.83■□□□□ 0.61
CACNA1A-257ENST00000638009 ENAMQ9NRM1 1142 aa18.83■□□□□ 0.61
CACNA1A-257ENST00000638009 MGAT4CQ9UBM8 478 aa18.83■□□□□ 0.61
CACNA1A-257ENST00000638009 PROM1O43490 865 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 PAHP00439 452 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 ERVK-8P63133 956 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 FSTL1Q12841 308 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 CAPSQ13938 189 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 MRI1Q9BV20 369 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 HPSEQ9Y251 543 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 MADDQ8WXG6 1647 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 TRAV6A0A075B6T7 132 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 GOT1P17174 413 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 PHF13Q86YI8 300 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 DNMT3AQ9Y6K1 912 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 ANGPTL7O43827 346 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF821O75541 412 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 NELFEP18615 380 aaKnown RBP18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 GBE1Q04446 702 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 DEFB128Q7Z7B8 93 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 ALDH16A1Q8IZ83 802 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 THEM6Q8WUY1 208 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 HOXB13Q92826 284 aaPredicted RBP18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 CLCQ05315 142 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 TBC1D16Q8TBP0 767 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 ARL6Q9H0F7 186 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 IPPKQ9H8X2 491 aa18.83■□□□□ 0.6
CACNA1A-257ENST00000638009 SCAMP3O14828 347 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 AHSA1O95433 338 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 TMPPEQ6ZT21 453 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 NCCRP1Q6ZVX7 275 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 HMX3A6NHT5 357 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ADAM10O14672 748 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 SNAPINO95295 136 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 CLRN1P58418 232 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 NRG1Q02297 640 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 EN1Q05925 392 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 UAP1L1Q3KQV9 507 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ZC3H12AQ5D1E8 599 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 MYRFLQ96LU7 910 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 PTGES2Q9H7Z7 377 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 FBXW2Q9UKT8 454 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KCNJ13O60928 360 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 RAB3BP20337 219 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KIAA1614Q5VZ46 1190 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ZNF367Q7RTV3 350 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 C7orf34Q96L11 122 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 OR51E2Q9H255 320 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KIAA2026Q5HYC2 2103 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 CACNA1IQ9P0X4 2223 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 F8VP50 259 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 IGKV5-2P06315 115 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 SERPINF1P36955 418 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 FRKP42685 505 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 NIPAL4Q0D2K0 466 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 DECR1Q16698 335 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 C1orf94Q6P1W5 598 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 USP49Q70CQ1 688 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 GLYATL2Q8WU03 294 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ZBED3Q96IU2 234 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 GAL3ST1Q99999 423 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ULBP1Q9BZM6 244 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 TOR1BO14657 336 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 IL1AP01583 271 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 POU2F1P14859 743 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 DNASE1P24855 282 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 PTGER3P43115 390 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 MARCH9Q86YJ5 346 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 GAD1Q99259 594 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KCNU1A8MYU2 1149 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 AKR1A1P14550 325 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 AFF3P51826 1226 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 MFSD13AQ14CX5 517 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KCTD18Q6PI47 426 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 LNX2Q8N448 690 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 KIAA0895Q8NCT3 520 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 OR8U9P0C7N5 309 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 NR4A2P43354 598 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 MZT1Q08AG7 82 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 CLEC12AQ5QGZ9 265 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ERN2Q76MJ5 926 aaKnown RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 GTPBP8Q8N3Z3 284 aaPredicted RBP18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 ISCA1Q9BUE6 129 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 CHST7Q9NS84 486 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 CENPMQ9NSP4 180 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 SAGE1Q9NXZ1 904 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 PCDHGA5Q9Y5G8 931 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 BCORL1Q5H9F3 1711 aa18.82■□□□□ 0.6
CACNA1A-257ENST00000638009 AP2A1O95782 977 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 GPR157Q5UAW9 335 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 DPY19L3Q6ZPD9 716 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 LILRB2Q8N423 598 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 KCNJ9Q92806 393 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 SMCO4Q9NRQ5 59 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 KCNIP1Q9NZI2 227 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 hCG_1818297A0A087WSY0 165 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 UBFD1O14562 309 aaKnown RBP18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 DFNA5O60443 496 aa18.81■□□□□ 0.6
CACNA1A-257ENST00000638009 CD6P30203 668 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms