RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 RBBP5Q15291 538 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ZIC1Q15915 447 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CPSF6Q16630 551 aaKnown RBP eCLIP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 HIST2H2ACQ16777 129 aaPredicted RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PAGE2BQ5JRK9 111 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 FCRL6Q6DN72 434 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 HIST2H2AA3Q6FI13 130 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 LETMD1Q6P1Q0 360 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 DHRS13Q6UX07 377 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ATG14Q6ZNE5 492 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 RBM44Q6ZP01 1051 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 SLCO6A1Q86UG4 719 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PAQR7Q86WK9 346 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PLD3Q8IV08 490 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CDYL2Q8N8U2 506 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 C19orf47Q8N9M1 422 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PIWIL2Q8TC59 973 aaKnown RBP13.85□□□□□ -0.19
LINC00339-208ENST00000634934 CCDC74BQ96LY2 380 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 AIF1LQ9BQI0 150 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 EFCAB11Q9BUY7 163 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 C20orf27Q9GZN8 174 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 EHD1Q9H4M9 534 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF225Q9UK10 706 aa13.85□□□□□ -0.19
LINC00339-208ENST00000634934 PCM1Q15154 2024 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 OR2A25A4D2G3 310 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 FFAR3O14843 346 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 HAT1O14929 419 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 GPR42O15529 346 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 UGDHO60701 494 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 THRAP10827 490 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 HGFP14210 728 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 CXCR2P25025 360 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 PGM1P36871 562 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 HNF4AP41235 474 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 CASP2P42575 452 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 CLCN2P51788 898 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 ACTR3P61158 418 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 INSM1Q01101 510 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-208ENST00000634934 KLC1Q07866 573 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 PCDH1Q08174 1060 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 GALNT1Q10472 559 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-208ENST00000634934 LAPTM5Q13571 262 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 SH2D4BQ5SQS7 431 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 LIPJQ5W064 366 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 FAM219BQ5XKK7 198 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF425Q6IV72 752 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 RINLQ6ZS11 566 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 PRSS42Q7Z5A4 293 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 B3GNT8Q7Z7M8 397 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 FAM129CQ86XR2 697 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 CARFQ8N187 725 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 KRT78Q8N1N4 520 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 TBC1D19Q8N5T2 526 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 L3MBTL4Q8NA19 623 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 RCBTB1Q8NDN9 531 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 ZNF740Q8NDX6 193 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 OR4K1Q8NGD4 311 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 METTL6Q8TCB7 284 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 STMN2Q93045 179 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 WDR34Q96EX3 536 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 PRR11Q96HE9 360 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-208ENST00000634934 KCNA7Q96RP8 456 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 ILKAPQ9H0C8 392 aaPredicted RBP13.84□□□□□ -0.19
LINC00339-208ENST00000634934 SPNS1Q9H2V7 528 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 TNFRSF12AQ9NP84 129 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 ANKMY1Q9P2S6 941 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 TRPS1Q9UHF7 1281 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
LINC00339-208ENST00000634934 FIS1Q9Y3D6 152 aa13.84□□□□□ -0.19
LINC00339-208ENST00000634934 A0A0J9YVX5 310 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 MED19A0JLT2 244 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 HGSO14964 777 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 SLC22A2O15244 555 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 TOX3O15405 576 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 OR1F1O43749 312 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 SNUPNO95149 360 aaKnown RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 CAPN1P07384 714 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 CDK4P11802 303 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 PCNAP12004 261 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 JUPP14923 745 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 HMOX2P30519 316 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 MLLT3P42568 568 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 CLDN6P56747 220 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 HSD11B2P80365 405 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 REEP5Q00765 189 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 CYP4F3Q08477 520 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 TUBB3Q13509 450 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 METTL21CQ5VZV1 264 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 GRHL2Q6ISB3 625 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 MED27Q6P2C8 311 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 SLITRK4Q8IW52 837 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 TCTN2Q96GX1 697 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 MAGEB10Q96LZ2 347 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 NR1H4Q96RI1 486 aaPredicted RBP13.83□□□□□ -0.2
LINC00339-208ENST00000634934 SORT1Q99523 831 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 FAM60AQ9NP50 221 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 PDE7BQ9NP56 450 aa13.83□□□□□ -0.2
LINC00339-208ENST00000634934 PDP2Q9P2J9 529 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms