RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	DRC3	Q9H069	523 aa		24.82	■■□□□ 1.56
UBE3A-222	ENST00000630907	RUVBL1	Q9Y265	456 aa	Known RBP	24.82	■■□□□ 1.56
UBE3A-222	ENST00000630907	C1QTNF9B	B2RNN3	333 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	HMGB1P1	B2RPK0	211 aa	Predicted RBP	24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	NDUFS4	O43181	175 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SERPIND1	P05546	499 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SLC35G6	P0C7Q6	338 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	C1QTNF9	P0C862	333 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SPTB	P11277	2137 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	GCGR	P47871	477 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SLC18A1	P54219	525 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	EMP3	P54852	163 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	CYP4F2	P78329	520 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	LCP2	Q13094	533 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	PWP1	Q13610	501 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	LAS2	Q8IYD9	372 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SLC38A9	Q8NBW4	561 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	GALNT6	Q8NCL4	622 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	OR4F6	Q8NGB9	312 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	SEC16B	Q96JE7	1060 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	MAGEB10	Q96LZ2	347 aa	Predicted RBP	24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	MACROD1	Q9BQ69	325 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	RHBG	Q9H310	441 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	CUTC	Q9NTM9	273 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	TXLNG	Q9NUQ3	528 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	STK38L	Q9Y2H1	464 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	AKAP13	Q12802	2813 aa		24.81	■■□□□ 1.56
UBE3A-222	ENST00000630907	ANKDD1B	A6NHY2	528 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	DHRS4L1	P0CG22	281 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	PCBP4	P57723	403 aa	Known RBP	24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	RGS1	Q08116	209 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	MAP7	Q14244	749 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	CPSF6	Q16630	551 aa	Known RBP eCLIP	24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	MANEA	Q5SRI9	462 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	GARNL3	Q5VVW2	1013 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	RHBDD2	Q6NTF9	364 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	C6orf15	Q6UXA7	325 aa	Predicted RBP	24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	FRMD7	Q6ZUT3	714 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	TTLL10	Q6ZVT0	673 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	TIPARP	Q7Z3E1	657 aa	Known RBP	24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	NUDCD3	Q8IVD9	361 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	NT5C	Q8TCD5	201 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	LRFN5	Q96NI6	719 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	ZNF382	Q96SR6	550 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	NKIRAS1	Q9NYS0	192 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	PCDHGA11	Q9Y5H2	935 aa		24.8	■■□□□ 1.56
UBE3A-222	ENST00000630907	MDC1	Q14676	2089 aa	Known RBP	24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907		A0A1B0GTL3	188 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	BIRC5	O15392	142 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	RAD1	O60671	282 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	CAPNS1	P04632	268 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	PCNA	P12004	261 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	ALAS2	P22557	587 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	COL9A2	Q14055	689 aa	Predicted RBP	24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	NDUFA9	Q16795	377 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	MUM1	Q2TAK8	710 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	GGTA1P	Q4G0N0	100 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	HHAT	Q5VTY9	493 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	GPRIN3	Q6ZVF9	776 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	NLGN4X	Q8N0W4	816 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	ESX1	Q8N693	406 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	OR7G3	Q8NG95	312 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	CREB3L4	Q8TEY5	395 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	REPS1	Q96D71	796 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	PRM3	Q9NNZ6	103 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	MLXIPL	Q9NP71	852 aa		24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	DHCR7	Q9UBM7	475 aa	Known RBP	24.79	■■□□□ 1.56
UBE3A-222	ENST00000630907	TEX51	A0A1B0GUA7	166 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	WDR91	A4D1P6	747 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907		H0YIV9	168 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	MEN1	O00255	615 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	ATP8B1	O43520	1251 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	TLX3	O43711	291 aa	Predicted RBP	24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	CLEC3A	O75596	197 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	KLK3	P07288	261 aa	Predicted RBP	24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	CCNYL3	P0C7X3	344 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	LIPC	P11150	499 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	SERPINB1	P30740	379 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	RORA	P35398	523 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	PKNOX1	P55347	436 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	GPS2	Q13227	327 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	ZRSR2	Q15696	482 aa	Known RBP	24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	ADNP2	Q6IQ32	1131 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	VN1R5	Q7Z5H4	357 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	SYVN1	Q86TM6	617 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	DTX1	Q86Y01	620 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	KCT2	Q8NC54	265 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	SNIP1	Q8TAD8	396 aa	Known RBP	24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	PROKR1	Q8TCW9	393 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	CCT6B	Q92526	530 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	CNDP1	Q96KN2	507 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	C10orf90	Q96M02	699 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	PAIP2	Q9BPZ3	127 aa	Known RBP	24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	NDOR1	Q9UHB4	597 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	TRPS1	Q9UHF7	1281 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	ZNF225	Q9UK10	706 aa		24.78	■■□□□ 1.56
UBE3A-222	ENST00000630907	DSCR3	O14972	297 aa		24.77	■■□□□ 1.56

Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms