RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 HOXC5Q00444 222 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 KCNAB2Q13303 367 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CST6Q15828 149 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 ZNF77Q15935 545 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SMN1Q16637 294 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 PAGE2BQ5JRK9 111 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PRAMEF9Q5VWM5 478 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 OR52E8Q6IFG1 317 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 KCTD8Q6ZWB6 473 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 COMMD6Q7Z4G1 85 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CPXM2Q8N436 756 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 OR8K5Q8NH50 307 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 LCN9Q8WX39 176 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 NAA50Q9GZZ1 169 aaKnown RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 ACTL8Q9H568 366 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 CCM2LQ9NUG4 571 aaPredicted RBP7.24□□□□□ -1.25
PKP4-217ENST00000628904 SLC25A37Q9NYZ2 338 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 PPT2Q9UMR5 302 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 SNX11Q9Y5W9 270 aa7.24□□□□□ -1.25
PKP4-217ENST00000628904 DOCK8Q8NF50 2099 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 COL4A6Q14031 1691 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 EDDM13A0A1B0GTR0 161 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 A0A1W2PRB8 838 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 H6PDO95479 791 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 HOXB3P14651 431 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 PVRP15151 417 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 POLR2CP19387 275 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 IGFBP5P24593 272 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RFC2P35250 354 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PFN3P60673 137 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 LRRC32Q14392 662 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ZXDCQ2QGD7 858 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 TMEM236Q5W0B7 351 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 FAM91A1Q658Y4 838 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ABRAXAS1Q6UWZ7 409 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 SFTPA2Q8IWL1 248 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ADHFE1Q8IWW8 467 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 FAM160A2Q8N612 972 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 ARL10Q8N8L6 244 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 TMEM102Q8N9M5 508 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 OR5D16Q8NGK9 328 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 OR9A1PQ8NGU1 263 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 HSH2DQ96JZ2 352 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 BARD1Q99728 777 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 QRSL1Q9H0R6 528 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 TPK1Q9H3S4 243 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ZNF556Q9HAH1 456 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 KRT84Q9NSB2 600 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PDCD11Q14690 1871 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 VWA8A3KMH1 1905 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PRSS51A0A1B0GVH4 220 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 A0A1W2PPW3 197 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 J3KTA2 159 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PRKNO60260 465 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 OR10H3O60404 316 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 SDC3O75056 442 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 EEDO75530 441 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 ENO2P09104 434 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 CTSEP14091 401 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ZNF30P17039 623 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PFKLP17858 780 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 CD22P20273 847 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 TCEA1P23193 301 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 HRH2P25021 359 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RRM2P31350 389 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RPL26P61254 145 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 LASP1Q14847 261 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 SLC14A2Q15849 920 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 NHSL2Q5HYW2 709 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 FAM46CQ5VWP2 391 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MTSS1LQ765P7 747 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 LRRTM4Q86VH4 590 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RAB42Q8N4Z0 105 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MINDY1Q8N5J2 469 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 TRAM1L1Q8N609 369 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 FAM81AQ8TBF8 368 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 SLC5A11Q8WWX8 675 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ZNF583Q96ND8 569 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 OR4K3Q96R72 315 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 NLNQ9BYT8 704 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 PNPLA3Q9NST1 481 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MRGBPQ9NV56 204 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 GULP1Q9UBP9 304 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 NDOR1Q9UHB4 597 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ABCG2Q9UNQ0 655 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 IRAK3Q9Y616 596 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MYO16Q9Y6X6 1858 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 LAMA1P25391 3075 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 POM121BA6NF01 834 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RAP2AP10114 183 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ZNF26P17031 533 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 RANBP1P43487 201 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 HSPA13P48723 471 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 CLK1P49759 484 aaKnown RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 SUOXP51687 545 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 RAD23AP54725 363 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 ARSFP54793 590 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MLLT10P55197 1068 aa7.23□□□□□ -1.25
PKP4-217ENST00000628904 MLLT1Q03111 559 aaPredicted RBP7.23□□□□□ -1.25
PKP4-217ENST00000628904 UBE3AQ05086 875 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms