RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 ENTPD1P49961 510 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CRYBA2P53672 197 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 RAE1P78406 368 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 IL5RAQ01344 420 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TEKQ02763 1124 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC14A1Q13336 389 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SPIDRQ14159 915 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ACOX1Q15067 660 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT8Q16880 541 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CARD16Q5EG05 197 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 ERICH5Q6P6B1 374 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 NLRP8Q86W28 1048 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 VRK3Q8IV63 474 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 PHACTR4Q8IZ21 702 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SELENOMQ8WWX9 145 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 MRPS31Q92665 395 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 COQ8BQ96D53 544 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 EPHX3Q9H6B9 360 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 SMURF2Q9HAU4 748 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 FANCEQ9HB96 536 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TM9SF3Q9HD45 589 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 TBC1D23Q9NUY8 699 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 FAIMQ9NVQ4 179 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 FAM120CQ9NX05 1096 aaKnown RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 BTNL2Q9UIR0 455 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 DNMT3AQ9Y6K1 912 aaPredicted RBP6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 C5orf42Q9H799 3197 aa6.93□□□□□ -1.3
CTNNA1-244ENST00000627109 CPSF4O95639 269 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 POP4O95707 220 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 UGT2B4P06133 528 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 TFPTP0C1Z6 253 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SRSF11Q05519 484 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 PIGFQ07326 219 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 EFR3AQ14156 821 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LAPTM4AQ15012 233 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 DUOXA1Q1HG43 343 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 GTDC1Q4AE62 458 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 GRHL2Q6ISB3 625 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 GALNT18Q6P9A2 607 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CBLL1Q75N03 491 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 R3HCC1LQ7Z5L2 792 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 ZNF557Q8N988 423 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 OR56A3Q8NH54 315 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CXorf40BQ96DE9 158 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 MRGPRX3Q96LB0 322 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 P2RY13Q9BPV8 354 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 INPP5KQ9BT40 448 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LHPPQ9H008 270 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 RAD18Q9NS91 495 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 DKK3Q9UBP4 350 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 ENPP5Q9UJA9 477 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 NDRG4Q9ULP0 352 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SAMD4AQ9UPU9 718 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 MAPRE3Q9UPY8 281 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LOC100130705A0A1B0GUX0 176 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LEFTY2O00292 366 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC1A7O00341 560 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 IL7RP16871 459 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CD247P20963 164 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 TACR1P25103 407 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 DDX6P26196 483 aaKnown RBP eCLIP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 HOXA9P31269 272 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 NEK2P51955 445 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LIMK1P53667 647 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CYP4F8P98187 520 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CD47Q08722 323 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 LRRC74AQ0VAA2 488 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 HYAL1Q12794 435 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 BNIP3Q12983 259 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 KCNAB2Q13303 367 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 DGCR6Q14129 220 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 CTF1Q16619 201 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 POM121L1PQ3SYA9 428 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 FRG2Q64ET8 278 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 NOXRED1Q6NXP6 359 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 BRAT1Q6PJG6 821 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 UBE2R2Q712K3 238 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 TECPR1Q7Z6L1 1165 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 ADIPOR2Q86V24 386 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC44A2Q8IWA5 706 aaPredicted RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 HS3ST5Q8IZT8 346 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 TRAM1L1Q8N609 369 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 PPP1R14AQ96A00 147 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 APIPQ96GX9 242 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 FRG2BQ96QU4 278 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 GABARAPL3Q9BY60 117 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SMG9Q9H0W8 520 aaKnown RBP6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 RUBCNLQ9H714 662 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 FKBP14Q9NWM8 211 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 GPRC5BQ9NZH0 403 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 KIF17Q9P2E2 1029 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 C3orf18Q9UK00 162 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 IRAK3Q9Y616 596 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 DGKBQ9Y6T7 804 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 COL6A3P12111 3177 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 SLC5A10A0PJK1 596 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 UPK3BL1B0FP48 263 aa6.92□□□□□ -1.3
CTNNA1-244ENST00000627109 UPK3BL2E5RIL1 263 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms