RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 FER1L6-AS2Q96M78 137 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 ATOH8Q96SQ7 321 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 SPSB2Q99619 263 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 MACROD1Q9BQ69 325 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 CCDC77Q9BR77 488 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 VPS11Q9H270 941 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 SEMA3GQ9NS98 782 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 NUDT4Q9NZJ9 180 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 TRPC4Q9UBN4 977 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 MAP4K5Q9Y4K4 846 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 SLC22A7Q9Y694 548 aa15.91■□□□□ 0.14
UBE3D-208ENST00000626828 FASNP49327 2511 aaKnown RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 EXOC1LA0A1B0GW35 172 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 MAP2K7O14733 419 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 RIPK2O43353 540 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 NSA2O95478 260 aaKnown RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 STATHP02808 62 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 SNRPAP09012 282 aaKnown RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 ZGLP1P0C6A0 271 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 COL6A2P12110 1019 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 HSPA7P48741 367 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 RBBP5Q15291 538 aaKnown RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 ATG9BQ674R7 924 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TMEM214Q6NUQ4 689 aaKnown RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TCTN3Q6NUS6 607 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TMPRSS11BQ86T26 416 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 KRT78Q8N1N4 520 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 KCT2Q8NC54 265 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 DCAKDQ8WVC6 231 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TMEM79Q9BSE2 394 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TXLNGYQ9BZA5 131 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 CD244Q9BZW8 370 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 TGIF2Q9GZN2 237 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 PITHD1Q9GZP4 211 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 SOX17Q9H6I2 414 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 NT5DC2Q9H857 520 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 ANKHQ9HCJ1 492 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 MKKSQ9NPJ1 570 aaPredicted RBP15.9■□□□□ 0.14
UBE3D-208ENST00000626828 CTSFQ9UBX1 484 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 KALRNO60229 2985 aa15.9■□□□□ 0.14
UBE3D-208ENST00000626828 URADA6NGE7 173 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 SUPT3HB4E1H0 165 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 B8ZZF3 427 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 SUPT3HO75486 399 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 C1QL1O75973 258 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 SERPIND1P05546 499 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 REEP5Q00765 189 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 IRF9Q00978 393 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 KLC1Q07866 573 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 RGS1Q08116 209 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 ATP1A4Q13733 1029 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 SLC29A2Q14542 456 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 HERC3Q15034 1050 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 VWA2Q5GFL6 755 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 NIPAL1Q6NVV3 410 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 ADGRD1Q6QNK2 874 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 PPP1R32Q7Z5V6 425 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 MRGPREQ86SM8 312 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 AMER3Q8N944 861 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 SNX31Q8N9S9 440 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 TTLQ8NG68 377 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 OR9A4Q8NGU2 314 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 NT5CQ8TCD5 201 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 EXT2Q93063 718 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 ISL2Q96A47 359 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 ESAMQ96AP7 390 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 GPR78Q96P69 363 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 TRIM55Q9BYV6 548 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 EHD1Q9H4M9 534 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 P4HTMQ9NXG6 502 aa15.89■□□□□ 0.13
UBE3D-208ENST00000626828 MRPS2Q9Y399 296 aaKnown RBP15.89■□□□□ 0.13
UBE3D-208ENST00000626828 TRIM49D1C9J1S8 452 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 AGPSO00116 658 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 UBXN8O00124 270 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 NDUFS4O43181 175 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 CCNT2O60583 730 aaKnown RBP15.88■□□□□ 0.13
UBE3D-208ENST00000626828 RBP1P09455 135 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 MTHFD2P13995 350 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 VARSP26640 1264 aaKnown RBP15.88■□□□□ 0.13
UBE3D-208ENST00000626828 MAGEA12P43365 314 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 EMP2P54851 167 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 FOXL2P58012 376 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 NFATC3Q12968 1075 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 PDK4Q16654 411 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 FBXO48Q5FWF7 155 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 TMIGD1Q6UXZ0 262 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 SHISA6Q6ZSJ9 500 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 LRRC70Q7Z2Q7 622 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 MTBPQ96DY7 904 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 MOCOSQ96EN8 888 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 SEC16BQ96JE7 1060 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 CRB3Q9BUF7 120 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 SPNS1Q9H2V7 528 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 ATP13A2Q9NQ11 1180 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 ZNF71Q9NQZ8 489 aaPredicted RBP15.88■□□□□ 0.13
UBE3D-208ENST00000626828 C14orf105Q9NVL8 296 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 FETUBQ9UGM5 382 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 C3orf18Q9UK00 162 aa15.88■□□□□ 0.13
UBE3D-208ENST00000626828 G3BP2Q9UN86 482 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms