RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 TMPRSS11BQ86T26 416 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 CISD2Q8N5K1 135 aaKnown RBP12.38□□□□□ -0.43
ATRX-208ENST00000622960 OR51Q1Q8NH59 317 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
ATRX-208ENST00000622960 TSNARE1Q96NA8 513 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 LMF1Q96S06 567 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
ATRX-208ENST00000622960 MOCS1Q9NZB8 636 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 ABI3Q9P2A4 366 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 MRPS2Q9Y399 296 aaKnown RBP12.38□□□□□ -0.43
ATRX-208ENST00000622960 SLC22A7Q9Y694 548 aa12.38□□□□□ -0.43
ATRX-208ENST00000622960 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 SGK494L7N484 410 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 H2AFYO75367 372 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 KLHL18O94889 574 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 BMP10O95393 424 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PRR35P0CG20 571 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 HPDP32754 393 aaPredicted RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 TSFMP43897 325 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 ETF1P62495 437 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 CDKL1Q00532 357 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 MEF2AQ02078 507 aaPredicted RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 NR6A1Q15406 480 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 ABHD17BQ5VST6 288 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 FAM180AQ6UWF9 173 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 SBSNQ6UWP8 590 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 THOC6Q86W42 341 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 CCDC25Q86WR0 208 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 TMEM151BQ8IW70 566 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 CTAGE3PQ8IX95 158 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 TCAIMQ8N3R3 496 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 ABHD11Q8NFV4 315 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 OR1F2PQ96R84 312 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 CPNE1Q99829 537 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 ZNF700Q9H0M5 742 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PELI2Q9HAT8 420 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PLAC1Q9HBJ0 212 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 ASF1BQ9NVP2 202 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PTGFRNQ9P2B2 879 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 SH2B3Q9UQQ2 575 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 NAALAD2Q9Y3Q0 740 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 OARD1Q9Y530 152 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PCDHGA10Q9Y5H3 936 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 PSAT1Q9Y617 370 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.37□□□□□ -0.43
ATRX-208ENST00000622960 BSNQ9UPA5 3926 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 MDC1Q14676 2089 aaKnown RBP12.37□□□□□ -0.43
ATRX-208ENST00000622960 ANKRD12Q6UB98 2062 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 HEATR5BQ9P2D3 2071 aa12.37□□□□□ -0.43
ATRX-208ENST00000622960 LOC102723996A0A087X1L8 192 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 A0A088AWK7 358 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 A0A1W2PQ72 361 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 PSMD12O00232 456 aaPredicted RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 CDC7O00311 574 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 RAD51CO43502 376 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 RDH16O75452 317 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 WDR47O94967 919 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 STMN1P16949 149 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 GNAZP19086 355 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 ZNF10P21506 573 aaPredicted RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 STX2P32856 288 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 AHRP35869 848 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 ACTN3Q08043 901 aaPredicted RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 ZNF460Q14592 562 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 USP10Q14694 798 aaKnown RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 RBBP5Q15291 538 aaKnown RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 INAQ16352 499 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 PPP1R3AQ16821 1122 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 BTBD16Q32M84 506 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 IGFL2Q6UWQ7 119 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 SYT10Q6XYQ8 523 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 CPEB2Q7Z5Q1 589 aaKnown RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 CUZD1Q86UP6 607 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 SPNS2Q8IVW8 549 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 ARHGEF39Q8N4T4 335 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 SIRT6Q8N6T7 355 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 KCT2Q8NC54 265 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 TTLQ8NG68 377 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 BRIX1Q8TDN6 353 aaKnown RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 SSC4DQ8WTU2 575 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 NEIL2Q969S2 332 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 TM4SF19Q96DZ7 209 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 MACROD1Q9BQ69 325 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 CAPS2Q9BXY5 557 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 PHACTR1Q9C0D0 580 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 VN1R1Q9GZP7 353 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.36□□□□□ -0.439e-9■■■■■ 30.4
ATRX-208ENST00000622960 SYNPO2LQ9H987 977 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 ZBTB20Q9HC78 741 aaPredicted RBP12.36□□□□□ -0.43
ATRX-208ENST00000622960 WWOXQ9NZC7 414 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 ZFP69BQ9UJL9 534 aa12.36□□□□□ -0.43
ATRX-208ENST00000622960 TRAV17A0A0B4J275 112 aa12.35□□□□□ -0.43
ATRX-208ENST00000622960 BLACEA4D250 179 aa12.35□□□□□ -0.43
ATRX-208ENST00000622960 ANKUB1A6NFN9 424 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms