RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 FFAR3O14843 346 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 PLD2O14939 933 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 GPR42O15529 346 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 SRPX2O60687 465 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 CRCPO75575 148 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 KRT6AP02538 564 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 KRT6BP04259 564 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 IGF2RP11717 2491 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 HMOX2P30519 316 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 SERPINB1P30740 379 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 CSTF2P33240 577 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 KRT6CP48668 564 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 RPL14P50914 215 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 TTC19Q6DKK2 380 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 MCATQ8IVS2 390 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 ZNF285Q96NJ3 590 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 ELOVL6Q9H5J4 265 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 SYNPO2LQ9H987 977 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 ENAMQ9NRM1 1142 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 SIDT1Q9NXL6 827 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 AKAP7Q9P0M2 348 aaPredicted RBP18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 ADGRE2Q9UHX3 823 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 TIMM22Q9Y584 194 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 PCDHGA8Q9Y5G5 932 aa18.96■□□□□ 0.63
PDLIM2-221ENST00000622702 MANBAO00462 879 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 HCRTR1O43613 425 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 BRINP1O60477 761 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 FOLR1P15328 257 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 PIK3CBP42338 1070 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 ACY1Q03154 408 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF33BQ06732 778 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 IFT88Q13099 833 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 KCNAB1Q14722 419 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 UGT3A2Q3SY77 523 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 CLEC6AQ6EIG7 209 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 FRMPD2BQ6IN97 320 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 VN1R4Q7Z5H5 301 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 CRLF3Q8IUI8 442 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 AGR3Q8TD06 166 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 USP7Q93009 1102 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 DMXL2Q8TDJ6 3036 aa18.95■□□□□ 0.62
PDLIM2-221ENST00000622702 ADAMTS20P59510 1910 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 ANKDD1BA6NHY2 528 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 TMEM233B4DJY2 109 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 H0YGG7 62 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 TNFSF15O95150 251 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 CAPNS1P04632 268 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 JMJD7P0C870 316 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 ARF3P61204 181 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 DEFB110Q30KQ9 67 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 TCHHL1Q5QJ38 904 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 ADNP2Q6IQ32 1131 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 RNF165Q6ZSG1 346 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 VN1R5Q7Z5H4 357 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 MTERF4Q7Z6M4 381 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 TRPV3Q8NET8 790 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 HUS1BQ8NHY5 278 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 CREB3L4Q8TEY5 395 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 ZNF473Q8WTR7 871 aaKnown RBP18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 RERGQ96A58 199 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 TM4SF19Q96DZ7 209 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 FAR2Q96K12 515 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 FGF21Q9NSA1 209 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 PISDQ9UG56 409 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 PPT2Q9UMR5 302 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 DNAJC15Q9Y5T4 150 aa18.94■□□□□ 0.62
PDLIM2-221ENST00000622702 LOC105369274A0A096LPK9 316 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 LOC102723532A0A0G2JNH3 316 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 FOXE1O00358 373 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 EDF1O60869 148 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 ULK1O75385 1050 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 CLEC3AO75596 197 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 CHEK2O96017 543 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 PCNAP12004 261 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 ITIH1P19827 911 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 SERPINB3P29508 390 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 RBMS1P29558 406 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 HTR6P50406 440 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 FAM219BQ5XKK7 198 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 FAM47EQ6ZV65 393 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 ASPGQ86U10 573 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 OR4N4Q8N0Y3 316 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 AFAP1L2Q8N4X5 818 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 PIWIL2Q8TC59 973 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 SELENOMQ8WWX9 145 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 ZCCHC14Q8WYQ9 949 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 SLC46A1Q96NT5 459 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 PNPOQ9NVS9 261 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 PSD3Q9NYI0 1048 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 DKK4Q9UBT3 224 aa18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 TPRP12270 2363 aaKnown RBP18.93■□□□□ 0.62
PDLIM2-221ENST00000622702 SERTM1A2A2V5 107 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 TMEM8BA6NDV4 472 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 CCL4P13236 92 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 NEK2P51955 445 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 HK2P52789 917 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 MAPK10P53779 464 aa18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 VSX2P58304 361 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-221ENST00000622702 PHEXP78562 749 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms