RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 FABP3P05413 133 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TSPAN19P0C672 248 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 MYL12AP19105 171 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 PPP2R1BP30154 601 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HOXA9P31269 272 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SSTR4P31391 388 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TGFBR2P37173 567 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IL12RB1P42701 662 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ATP12AP54707 1039 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ARPC4P59998 168 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SNRPD2P62316 118 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ST3GAL4Q11206 333 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SERINC3Q13530 473 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CAMK2BQ13554 666 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 UPP1Q16831 310 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RD3Q7Z3Z2 195 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 GPR149Q86SP6 731 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ADAMTSL2Q86TH1 951 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF557Q8N988 423 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF675Q8TD23 568 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 COL26A1Q96A83 441 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HSH2DQ96JZ2 352 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 FEVQ99581 238 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CLSTN3Q9BQT9 956 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IRF2BPLQ9H1B7 796 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ZDHHC6Q9H6R6 413 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CSNK1G1Q9HCP0 422 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HEBP1Q9NRV9 189 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM184CQ9NVA4 438 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ELOVL2Q9NXB9 296 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SAGE1Q9NXZ1 904 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 NUFIP1Q9UHK0 495 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SSC5DA1L4H1 1573 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 BRWD1Q9NSI6 2320 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 PARP14Q460N5 1801 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ANKDD1BA6NHY2 528 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 METTL15A6NJ78 407 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SNTNA6NMZ2 147 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 HAS3O00219 553 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 KIAA0513O60268 411 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CPNE3O75131 537 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IGLV3-25P01717 112 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CKMT1AP12532 417 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ENGP17813 658 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 OGNP20774 298 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 NOS3P29474 1203 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CA5AP35218 305 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SLC11A1P49279 550 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SLAMF1Q13291 335 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 LRRC26Q2I0M4 334 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 USP39Q53GS9 565 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 AGAP6Q5VW22 663 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SHQ1Q6PI26 577 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 AFTPHQ6ULP2 937 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 PRSS48Q7RTY5 328 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CLECL1Q8IZS7 167 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 AADATQ8N5Z0 425 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TP53I13Q8NBR0 393 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM203Q969S6 136 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TADA1Q96BN2 335 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 AGAP4Q96P64 663 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 OR5M11Q96RB7 305 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IL4I1Q96RQ9 567 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TMEM175Q9BSA9 504 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ATG10Q9H0Y0 220 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CCSER2Q9H7U1 834 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SP140LQ9H930 580 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RPRD1BQ9NQG5 326 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SNTG1Q9NSN8 517 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RLIMQ9NVW2 624 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TAS2R9Q9NYW1 312 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ZNF624Q9P2J8 865 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RAPGEFL1Q9UHV5 662 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RAB23Q9ULC3 237 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TNS1Q9HBL0 1735 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ARID1BQ8NFD5 2236 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CLIC1O00299 241 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 WWP2O00308 870 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IL6P05231 212 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RPLP0P05388 317 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CSF2RAP15509 400 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CST5P28325 142 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 GKP32189 559 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RPS14P62263 151 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 CSNK2BP67870 215 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TSTQ16762 297 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 SPATS1Q496A3 300 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TSPYL5Q86VY4 417 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 KLHDC8BQ8IXV7 354 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 STK40Q8N2I9 435 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 C7orf57Q8NEG2 295 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 IL17RDQ8NFM7 739 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 C2orf15Q8WU43 125 aaKnown RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 TCF25Q9BQ70 676 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RANGRFQ9HD47 186 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ABCB9Q9NP78 766 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 COQ3Q9NZJ6 369 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 RHCGQ9UBD6 479 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 MUTYHQ9UIF7 546 aa6.73□□□□□ -1.33
NEDD9-216ENST00000620854 ITM2BQ9Y287 266 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms